Gene : Glyma.20G028100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12214 - GC-RICH SEQUENCE DNA-BINDING FACTOR Genomic Order:  281
Name:  ? Glyma.20G028100 Secondary Identifier:  ? PAC:30523390
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G028100 0.5kb upstream 0.5kb upstream 6073 true Chr20: 3214045-3220117 Glycine max
Glyma.20G028100 0.5kb upstream 0.5kb upstream 500 false Chr20: 3219618-3220117 Glycine max
Glyma.20G028100 0.5kb downstream 0.5kb downstream 6073 true Chr20: 3213545-3219617 Glycine max
Glyma.20G028100 0.5kb downstream 0.5kb downstream 500 false Chr20: 3213545-3214044 Glycine max
Glyma.20G028100 1.0kb upstream 1.0kb upstream 6573 true Chr20: 3214045-3220617 Glycine max
Glyma.20G028100 1.0kb upstream 1.0kb upstream 1000 false Chr20: 3219618-3220617 Glycine max
Glyma.20G028100 1.0kb downstream 1.0kb downstream 6573 true Chr20: 3213045-3219617 Glycine max
Glyma.20G028100 1.0kb downstream 1.0kb downstream 1000 false Chr20: 3213045-3214044 Glycine max
Glyma.20G028100 2.0kb upstream 2.0kb upstream 7573 true Chr20: 3214045-3221617 Glycine max
Glyma.20G028100 2.0kb upstream 2.0kb upstream 2000 false Chr20: 3219618-3221617 Glycine max
Glyma.20G028100 2.0kb downstream 2.0kb downstream 7573 true Chr20: 3212045-3219617 Glycine max
Glyma.20G028100 2.0kb downstream 2.0kb downstream 2000 false Chr20: 3212045-3214044 Glycine max
Glyma.20G028100 5.0kb upstream 5.0kb upstream 10573 true Chr20: 3214045-3224617 Glycine max
Glyma.20G028100 5.0kb upstream 5.0kb upstream 5000 false Chr20: 3219618-3224617 Glycine max
Glyma.20G028100 5.0kb downstream 5.0kb downstream 10573 true Chr20: 3209045-3219617 Glycine max
Glyma.20G028100 5.0kb downstream 5.0kb downstream 5000 false Chr20: 3209045-3214044 Glycine max
Glyma.20G028100 10.0kb upstream 10.0kb upstream 15573 true Chr20: 3214045-3229617 Glycine max
Glyma.20G028100 10.0kb upstream 10.0kb upstream 10000 false Chr20: 3219618-3229617 Glycine max
Glyma.20G028100 10.0kb downstream 10.0kb downstream 15573 true Chr20: 3204045-3219617 Glycine max
Glyma.20G028100 10.0kb downstream 10.0kb downstream 10000 false Chr20: 3204045-3214044 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301094 5265 Fabidae View MSA
124050258 5270 Rosid View MSA
123739930 5271 Pentapetalae View MSA
122786850 5272 Eudicot View MSA
122041525 5273 Angiosperm View MSA
121344112 5274 Embryophyte View MSA
123425379 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.72382 0.0 20.1042   High
cufflinks 3.28331 0.0 10.7608    
cufflinks 3.80224 0.0 14.1322    
cufflinks 4.14179 0.0 15.3371    
cufflinks 4.05919 0.0 12.737    
cufflinks 2.93492 0.0 11.4005   Low
cufflinks 3.79693 0.0 12.111    
cufflinks 3.87154 0.0 14.2408    
cufflinks 2.91337 0.0 11.441   Low
cufflinks 0.997        
cufflinks 0.917       Low
cufflinks 1.495       High
cufflinks 1.43        
cufflinks 1.63       High
cufflinks 0.849       Low
cufflinks 1.184        
cufflinks 0.92       Low
cufflinks 1.237        
cufflinks 1.732       High
cufflinks 1.226        
cufflinks 0.854       Low
cufflinks 1.37        
cufflinks 1.475        
cufflinks 1.172        
cufflinks 1.104        
cufflinks 1.122        

0 Strain