Gene : Glyma.20G065600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12303:SF6 - UPF0586 PROTEIN C9ORF41 Genomic Order:  656
Name:  ? Glyma.20G065600 Secondary Identifier:  ? PAC:30519485
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G065600 0.5kb upstream 0.5kb upstream 9044 true Chr20: 23254304-23263347 Glycine max
Glyma.20G065600 0.5kb upstream 0.5kb upstream 500 false Chr20: 23254304-23254803 Glycine max
Glyma.20G065600 0.5kb downstream 0.5kb downstream 9044 true Chr20: 23254804-23263847 Glycine max
Glyma.20G065600 0.5kb downstream 0.5kb downstream 500 false Chr20: 23263348-23263847 Glycine max
Glyma.20G065600 1.0kb upstream 1.0kb upstream 9544 true Chr20: 23253804-23263347 Glycine max
Glyma.20G065600 1.0kb upstream 1.0kb upstream 1000 false Chr20: 23253804-23254803 Glycine max
Glyma.20G065600 1.0kb downstream 1.0kb downstream 9544 true Chr20: 23254804-23264347 Glycine max
Glyma.20G065600 1.0kb downstream 1.0kb downstream 1000 false Chr20: 23263348-23264347 Glycine max
Glyma.20G065600 2.0kb upstream 2.0kb upstream 10544 true Chr20: 23252804-23263347 Glycine max
Glyma.20G065600 2.0kb upstream 2.0kb upstream 2000 false Chr20: 23252804-23254803 Glycine max
Glyma.20G065600 2.0kb downstream 2.0kb downstream 10544 true Chr20: 23254804-23265347 Glycine max
Glyma.20G065600 2.0kb downstream 2.0kb downstream 2000 false Chr20: 23263348-23265347 Glycine max
Glyma.20G065600 5.0kb upstream 5.0kb upstream 13544 true Chr20: 23249804-23263347 Glycine max
Glyma.20G065600 5.0kb upstream 5.0kb upstream 5000 false Chr20: 23249804-23254803 Glycine max
Glyma.20G065600 5.0kb downstream 5.0kb downstream 13544 true Chr20: 23254804-23268347 Glycine max
Glyma.20G065600 5.0kb downstream 5.0kb downstream 5000 false Chr20: 23263348-23268347 Glycine max
Glyma.20G065600 10.0kb upstream 10.0kb upstream 18544 true Chr20: 23244804-23263347 Glycine max
Glyma.20G065600 10.0kb upstream 10.0kb upstream 10000 false Chr20: 23244804-23254803 Glycine max
Glyma.20G065600 10.0kb downstream 10.0kb downstream 18544 true Chr20: 23254804-23273347 Glycine max
Glyma.20G065600 10.0kb downstream 10.0kb downstream 10000 false Chr20: 23263348-23273347 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304958 5265 Fabidae View MSA
124060622 5270 Rosid View MSA
123739878 5271 Pentapetalae View MSA
122791925 5272 Eudicot View MSA
122046455 5273 Angiosperm View MSA
121344322 5274 Embryophyte View MSA
123425361 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.3153 0.0 38.1918   High
cufflinks 11.7175 0.0 31.3237    
cufflinks 12.8322 0.0 34.2444    
cufflinks 8.69108 0.0 23.4801   Low
cufflinks 12.1769 0.0 32.5415    
cufflinks 9.36754 0.0 25.2243    
cufflinks 10.7874 0.0 28.9212    
cufflinks 8.74417 0.0 23.6129   Low
cufflinks 14.454 0.0 38.5615   High
cufflinks 2.292       Low
cufflinks 2.511        
cufflinks 3.232        
cufflinks 3.361        
cufflinks 4.498       High
cufflinks 3.785        
cufflinks 3.698        
cufflinks 1.758       Low
cufflinks 3.337        
cufflinks 4.128        
cufflinks 4.526       High
cufflinks 2.646        
cufflinks 4.042        
cufflinks 3.904        
cufflinks 2.21       Low
cufflinks 4.433       High
cufflinks 2.575        

0 Strain