Gene : Glyma.20G062000 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR13994//PTHR13994:SF15 - NUDIX HYDROLASE RELATED Genomic Order:  620
Name:  ? Glyma.20G062000 Secondary Identifier:  ? PAC:30523288
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5381 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G062000 0.5kb upstream 0.5kb upstream 4481 true Chr20: 19383808-19388288 Glycine max
Glyma.20G062000 0.5kb upstream 0.5kb upstream 500 false Chr20: 19383808-19384307 Glycine max
Glyma.20G062000 0.5kb downstream 0.5kb downstream 4481 true Chr20: 19384308-19388788 Glycine max
Glyma.20G062000 0.5kb downstream 0.5kb downstream 500 false Chr20: 19388289-19388788 Glycine max
Glyma.20G062000 1.0kb upstream 1.0kb upstream 4981 true Chr20: 19383308-19388288 Glycine max
Glyma.20G062000 1.0kb upstream 1.0kb upstream 1000 false Chr20: 19383308-19384307 Glycine max
Glyma.20G062000 1.0kb downstream 1.0kb downstream 4981 true Chr20: 19384308-19389288 Glycine max
Glyma.20G062000 1.0kb downstream 1.0kb downstream 1000 false Chr20: 19388289-19389288 Glycine max
Glyma.20G062000 2.0kb upstream 2.0kb upstream 5981 true Chr20: 19382308-19388288 Glycine max
Glyma.20G062000 2.0kb upstream 2.0kb upstream 2000 false Chr20: 19382308-19384307 Glycine max
Glyma.20G062000 2.0kb downstream 2.0kb downstream 5981 true Chr20: 19384308-19390288 Glycine max
Glyma.20G062000 2.0kb downstream 2.0kb downstream 2000 false Chr20: 19388289-19390288 Glycine max
Glyma.20G062000 5.0kb upstream 5.0kb upstream 8981 true Chr20: 19379308-19388288 Glycine max
Glyma.20G062000 5.0kb upstream 5.0kb upstream 5000 false Chr20: 19379308-19384307 Glycine max
Glyma.20G062000 5.0kb downstream 5.0kb downstream 8981 true Chr20: 19384308-19393288 Glycine max
Glyma.20G062000 5.0kb downstream 5.0kb downstream 5000 false Chr20: 19388289-19393288 Glycine max
Glyma.20G062000 10.0kb upstream 10.0kb upstream 13981 true Chr20: 19374308-19388288 Glycine max
Glyma.20G062000 10.0kb upstream 10.0kb upstream 10000 false Chr20: 19374308-19384307 Glycine max
Glyma.20G062000 10.0kb downstream 10.0kb downstream 13981 true Chr20: 19384308-19398288 Glycine max
Glyma.20G062000 10.0kb downstream 10.0kb downstream 10000 false Chr20: 19388289-19398288 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297143 5265 Fabidae View MSA
124071917 5270 Rosid View MSA
123746480 5271 Pentapetalae View MSA
122788941 5272 Eudicot View MSA
122049902 5273 Angiosperm View MSA
121347954 5274 Embryophyte View MSA
123428722 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.58132 0.0 19.0044   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.537323 0.0 1.9995    
cufflinks 0.0845957 0.0 0.339963 Low  
cufflinks 0.174372 0.0 0.682823 Low  
cufflinks 2.49905 0.0 8.235    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0153508 0.0 0.0694773 Low Low
cufflinks 0.356425 0.0 1.35294    
cufflinks 1.739        
cufflinks 9.158     High High
cufflinks 0.873        
cufflinks 1.006        
cufflinks 0.034     Low Low
cufflinks 0.618        
cufflinks 0.075     Low  
cufflinks 29.676     High High
cufflinks 0.269        
cufflinks 0.063     Low Low
cufflinks 0.041     Low Low
cufflinks 1.984        
cufflinks 0.425        
cufflinks 0.177        
cufflinks 14.309     High High
cufflinks 0.03     Low Low
cufflinks 10.775     High High

0 Strain