Gene : Glyma.20G083800 G. max Wm82.a2.v1
Defline:  (1 of 20) PTHR10484 - HISTONE H4 Genomic Order:  838
Name:  ? Glyma.20G083800 Secondary Identifier:  ? PAC:30520892
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G083800 0.5kb upstream 0.5kb upstream 1588 true Chr20: 31482676-31484263 Glycine max
Glyma.20G083800 0.5kb upstream 0.5kb upstream 500 false Chr20: 31483764-31484263 Glycine max
Glyma.20G083800 0.5kb downstream 0.5kb downstream 1588 true Chr20: 31482176-31483763 Glycine max
Glyma.20G083800 0.5kb downstream 0.5kb downstream 500 false Chr20: 31482176-31482675 Glycine max
Glyma.20G083800 1.0kb upstream 1.0kb upstream 2088 true Chr20: 31482676-31484763 Glycine max
Glyma.20G083800 1.0kb upstream 1.0kb upstream 1000 false Chr20: 31483764-31484763 Glycine max
Glyma.20G083800 1.0kb downstream 1.0kb downstream 2088 true Chr20: 31481676-31483763 Glycine max
Glyma.20G083800 1.0kb downstream 1.0kb downstream 1000 false Chr20: 31481676-31482675 Glycine max
Glyma.20G083800 2.0kb upstream 2.0kb upstream 3088 true Chr20: 31482676-31485763 Glycine max
Glyma.20G083800 2.0kb upstream 2.0kb upstream 2000 false Chr20: 31483764-31485763 Glycine max
Glyma.20G083800 2.0kb downstream 2.0kb downstream 3088 true Chr20: 31480676-31483763 Glycine max
Glyma.20G083800 2.0kb downstream 2.0kb downstream 2000 false Chr20: 31480676-31482675 Glycine max
Glyma.20G083800 5.0kb upstream 5.0kb upstream 6088 true Chr20: 31482676-31488763 Glycine max
Glyma.20G083800 5.0kb upstream 5.0kb upstream 5000 false Chr20: 31483764-31488763 Glycine max
Glyma.20G083800 5.0kb downstream 5.0kb downstream 6088 true Chr20: 31477676-31483763 Glycine max
Glyma.20G083800 5.0kb downstream 5.0kb downstream 5000 false Chr20: 31477676-31482675 Glycine max
Glyma.20G083800 10.0kb upstream 10.0kb upstream 11088 true Chr20: 31482676-31493763 Glycine max
Glyma.20G083800 10.0kb upstream 10.0kb upstream 10000 false Chr20: 31483764-31493763 Glycine max
Glyma.20G083800 10.0kb downstream 10.0kb downstream 11088 true Chr20: 31472676-31483763 Glycine max
Glyma.20G083800 10.0kb downstream 10.0kb downstream 10000 false Chr20: 31472676-31482675 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315310 5265 Fabidae View MSA
124071191 5270 Rosid View MSA
123744042 5271 Pentapetalae View MSA
122795736 5272 Eudicot View MSA
122049891 5273 Angiosperm View MSA
121350125 5274 Embryophyte View MSA
123427399 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.9884 0.0 51.9872   Low
cufflinks 127.548 0.0 367.544 High High
cufflinks 24.3033 0.0 65.6469 High  
cufflinks 24.7667 0.0 66.7666 High  
cufflinks 72.2324 0.0 197.087 High  
cufflinks 95.967 0.0 267.996 High High
cufflinks 64.305 0.0 173.923 High  
cufflinks 29.362 0.0 78.7171 High  
cufflinks 69.1431 0.0 187.785 High  
cufflinks 54.736     High  
cufflinks 18.496     High Low
cufflinks 33.611     High  
cufflinks 79.164     High  
cufflinks 110.187     High  
cufflinks 21.875     High  
cufflinks 118.502     High  
cufflinks 26.511     High  
cufflinks 27.043     High  
cufflinks 122.119     High  
cufflinks 77.895     High  
cufflinks 18.285     High Low
cufflinks 111.135     High  
cufflinks 307.056     High High
cufflinks 15.723     High Low
cufflinks 90.713     High  
cufflinks 26.271     High  

0 Strain