Gene : Glyma.20G086700 G. max Wm82.a2.v1
Defline:  (1 of 25) PF00917 - MATH domain (MATH) Genomic Order:  867
Name:  ? Glyma.20G086700 Secondary Identifier:  ? PAC:30519602
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G086700 0.5kb upstream 0.5kb upstream 18546 true Chr20: 32239990-32258535 Glycine max
Glyma.20G086700 0.5kb upstream 0.5kb upstream 500 false Chr20: 32239990-32240489 Glycine max
Glyma.20G086700 0.5kb downstream 0.5kb downstream 18546 true Chr20: 32240490-32259035 Glycine max
Glyma.20G086700 0.5kb downstream 0.5kb downstream 500 false Chr20: 32258536-32259035 Glycine max
Glyma.20G086700 1.0kb upstream 1.0kb upstream 19046 true Chr20: 32239490-32258535 Glycine max
Glyma.20G086700 1.0kb upstream 1.0kb upstream 1000 false Chr20: 32239490-32240489 Glycine max
Glyma.20G086700 1.0kb downstream 1.0kb downstream 19046 true Chr20: 32240490-32259535 Glycine max
Glyma.20G086700 1.0kb downstream 1.0kb downstream 1000 false Chr20: 32258536-32259535 Glycine max
Glyma.20G086700 2.0kb upstream 2.0kb upstream 20046 true Chr20: 32238490-32258535 Glycine max
Glyma.20G086700 2.0kb upstream 2.0kb upstream 2000 false Chr20: 32238490-32240489 Glycine max
Glyma.20G086700 2.0kb downstream 2.0kb downstream 20046 true Chr20: 32240490-32260535 Glycine max
Glyma.20G086700 2.0kb downstream 2.0kb downstream 2000 false Chr20: 32258536-32260535 Glycine max
Glyma.20G086700 5.0kb upstream 5.0kb upstream 23046 true Chr20: 32235490-32258535 Glycine max
Glyma.20G086700 5.0kb upstream 5.0kb upstream 5000 false Chr20: 32235490-32240489 Glycine max
Glyma.20G086700 5.0kb downstream 5.0kb downstream 23046 true Chr20: 32240490-32263535 Glycine max
Glyma.20G086700 5.0kb downstream 5.0kb downstream 5000 false Chr20: 32258536-32263535 Glycine max
Glyma.20G086700 10.0kb upstream 10.0kb upstream 28046 true Chr20: 32230490-32258535 Glycine max
Glyma.20G086700 10.0kb upstream 10.0kb upstream 10000 false Chr20: 32230490-32240489 Glycine max
Glyma.20G086700 10.0kb downstream 10.0kb downstream 28046 true Chr20: 32240490-32268535 Glycine max
Glyma.20G086700 10.0kb downstream 10.0kb downstream 10000 false Chr20: 32258536-32268535 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312741 5265 Fabidae View MSA
124063906 5270 Rosid View MSA
123740151 5271 Pentapetalae View MSA
122794933 5272 Eudicot View MSA
122043519 5273 Angiosperm View MSA
121350769 5274 Embryophyte View MSA
123425613 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.7019 0.0 40.9905    
cufflinks 9.22642 0.0 32.8983    
cufflinks 12.05 0.0 48.7628    
cufflinks 9.08351 0.0 35.8366    
cufflinks 9.19642 0.0 35.9485    
cufflinks 10.2331 0.0 36.7341    
cufflinks 16.4929 0.0 63.8801   High
cufflinks 9.35946 0.0 37.0642    
cufflinks 10.6464 0.0 41.1394    
cufflinks 0.425       Low
cufflinks 1.097       High
cufflinks 0.585        
cufflinks 0.479        
cufflinks 0.438       Low
cufflinks 1.415       High
cufflinks 0.712        
cufflinks 0.328       Low
cufflinks 0.506        
cufflinks 0.595        
cufflinks 0.843        
cufflinks 0.991       High
cufflinks 0.762        
cufflinks 0.483        
cufflinks 0.933        
cufflinks 0.783        
cufflinks 0.831        

0 Strain