Gene : Glyma.20G089700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR23423:SF17 - PROTEIN F40E10.6 Genomic Order:  897
Name:  ? Glyma.20G089700 Secondary Identifier:  ? PAC:30523057
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G089700 0.5kb upstream 0.5kb upstream 4407 true Chr20: 33175873-33180279 Glycine max
Glyma.20G089700 0.5kb upstream 0.5kb upstream 500 false Chr20: 33175873-33176372 Glycine max
Glyma.20G089700 0.5kb downstream 0.5kb downstream 4407 true Chr20: 33176373-33180779 Glycine max
Glyma.20G089700 0.5kb downstream 0.5kb downstream 500 false Chr20: 33180280-33180779 Glycine max
Glyma.20G089700 1.0kb upstream 1.0kb upstream 4907 true Chr20: 33175373-33180279 Glycine max
Glyma.20G089700 1.0kb upstream 1.0kb upstream 1000 false Chr20: 33175373-33176372 Glycine max
Glyma.20G089700 1.0kb downstream 1.0kb downstream 4907 true Chr20: 33176373-33181279 Glycine max
Glyma.20G089700 1.0kb downstream 1.0kb downstream 1000 false Chr20: 33180280-33181279 Glycine max
Glyma.20G089700 2.0kb upstream 2.0kb upstream 5907 true Chr20: 33174373-33180279 Glycine max
Glyma.20G089700 2.0kb upstream 2.0kb upstream 2000 false Chr20: 33174373-33176372 Glycine max
Glyma.20G089700 2.0kb downstream 2.0kb downstream 5907 true Chr20: 33176373-33182279 Glycine max
Glyma.20G089700 2.0kb downstream 2.0kb downstream 2000 false Chr20: 33180280-33182279 Glycine max
Glyma.20G089700 5.0kb upstream 5.0kb upstream 8907 true Chr20: 33171373-33180279 Glycine max
Glyma.20G089700 5.0kb upstream 5.0kb upstream 5000 false Chr20: 33171373-33176372 Glycine max
Glyma.20G089700 5.0kb downstream 5.0kb downstream 8907 true Chr20: 33176373-33185279 Glycine max
Glyma.20G089700 5.0kb downstream 5.0kb downstream 5000 false Chr20: 33180280-33185279 Glycine max
Glyma.20G089700 10.0kb upstream 10.0kb upstream 13907 true Chr20: 33166373-33180279 Glycine max
Glyma.20G089700 10.0kb upstream 10.0kb upstream 10000 false Chr20: 33166373-33176372 Glycine max
Glyma.20G089700 10.0kb downstream 10.0kb downstream 13907 true Chr20: 33176373-33190279 Glycine max
Glyma.20G089700 10.0kb downstream 10.0kb downstream 10000 false Chr20: 33180280-33190279 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255164 5265 Fabidae View MSA
124062377 5270 Rosid View MSA
123741226 5271 Pentapetalae View MSA
122787885 5272 Eudicot View MSA
122045172 5273 Angiosperm View MSA
121348842 5274 Embryophyte View MSA
123427407 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.7046 0.0 36.7249    
cufflinks 12.2536 0.0 32.9429   Low
cufflinks 21.8359 0.0 58.396 High High
cufflinks 14.6932 0.0 39.2881    
cufflinks 14.2158 0.0 38.0593    
cufflinks 19.1447 0.0 51.0852   High
cufflinks 17.8596 0.0 47.6504    
cufflinks 16.3082 0.0 43.5324    
cufflinks 13.1361 0.0 35.2158    
cufflinks 5.02        
cufflinks 4.598        
cufflinks 6.607       High
cufflinks 6.15       High
cufflinks 6.375       High
cufflinks 2.705       Low
cufflinks 4.314        
cufflinks 3.045       Low
cufflinks 6.621       High
cufflinks 5.279        
cufflinks 3.89        
cufflinks 4.826        
cufflinks 4.534        
cufflinks 4.42        
cufflinks 6.052        
cufflinks 3.937        
cufflinks 4.811        

0 Strain