Gene : Glyma.20G124600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22504 - REPRESSOR OF RNA POLYMERASE III TRANSCRIPTION MAF1 Genomic Order:  1246
Name:  ? Glyma.20G124600 Secondary Identifier:  ? PAC:30520940
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G124600 0.5kb upstream 0.5kb upstream 4273 true Chr20: 36699421-36703693 Glycine max
Glyma.20G124600 0.5kb upstream 0.5kb upstream 500 false Chr20: 36703194-36703693 Glycine max
Glyma.20G124600 0.5kb downstream 0.5kb downstream 4273 true Chr20: 36698921-36703193 Glycine max
Glyma.20G124600 0.5kb downstream 0.5kb downstream 500 false Chr20: 36698921-36699420 Glycine max
Glyma.20G124600 1.0kb upstream 1.0kb upstream 4773 true Chr20: 36699421-36704193 Glycine max
Glyma.20G124600 1.0kb upstream 1.0kb upstream 1000 false Chr20: 36703194-36704193 Glycine max
Glyma.20G124600 1.0kb downstream 1.0kb downstream 4773 true Chr20: 36698421-36703193 Glycine max
Glyma.20G124600 1.0kb downstream 1.0kb downstream 1000 false Chr20: 36698421-36699420 Glycine max
Glyma.20G124600 2.0kb upstream 2.0kb upstream 5773 true Chr20: 36699421-36705193 Glycine max
Glyma.20G124600 2.0kb upstream 2.0kb upstream 2000 false Chr20: 36703194-36705193 Glycine max
Glyma.20G124600 2.0kb downstream 2.0kb downstream 5773 true Chr20: 36697421-36703193 Glycine max
Glyma.20G124600 2.0kb downstream 2.0kb downstream 2000 false Chr20: 36697421-36699420 Glycine max
Glyma.20G124600 5.0kb upstream 5.0kb upstream 8773 true Chr20: 36699421-36708193 Glycine max
Glyma.20G124600 5.0kb upstream 5.0kb upstream 5000 false Chr20: 36703194-36708193 Glycine max
Glyma.20G124600 5.0kb downstream 5.0kb downstream 8773 true Chr20: 36694421-36703193 Glycine max
Glyma.20G124600 5.0kb downstream 5.0kb downstream 5000 false Chr20: 36694421-36699420 Glycine max
Glyma.20G124600 10.0kb upstream 10.0kb upstream 13773 true Chr20: 36699421-36713193 Glycine max
Glyma.20G124600 10.0kb upstream 10.0kb upstream 10000 false Chr20: 36703194-36713193 Glycine max
Glyma.20G124600 10.0kb downstream 10.0kb downstream 13773 true Chr20: 36689421-36703193 Glycine max
Glyma.20G124600 10.0kb downstream 10.0kb downstream 10000 false Chr20: 36689421-36699420 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308593 5265 Fabidae View MSA
124066988 5270 Rosid View MSA
123748418 5271 Pentapetalae View MSA
122792340 5272 Eudicot View MSA
122047316 5273 Angiosperm View MSA
121345866 5274 Embryophyte View MSA
123424535 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.864 0.0 104.562 High  
cufflinks 15.9802 0.0 58.777    
cufflinks 57.5262 0.0 218.867 High High
cufflinks 22.2131 0.0 79.532 High  
cufflinks 10.0934 0.0 33.5156   Low
cufflinks 26.2791 0.0 92.6976 High  
cufflinks 11.0615 0.0 36.2543   Low
cufflinks 17.849 0.0 65.0915    
cufflinks 14.9355 0.0 46.1672    
cufflinks 1.805       Low
cufflinks 7.084     High High
cufflinks 6.356        
cufflinks 1.697       Low
cufflinks 1.078       Low
cufflinks 3.629        
cufflinks 5.001        
cufflinks 1.423       Low
cufflinks 4.328        
cufflinks 2.953        
cufflinks 6.889     High High
cufflinks 6.301     High  
cufflinks 6.483        
cufflinks 3.401        
cufflinks 4.952        
cufflinks 6.23        
cufflinks 2.894        

0 Strain