Gene : Glyma.20G114700 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10621//PTHR10621:SF12 - UV EXCISION REPAIR PROTEIN RAD23 Genomic Order:  1147
Name:  ? Glyma.20G114700 Secondary Identifier:  ? PAC:30520031
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G114700 0.5kb upstream 0.5kb upstream 4614 true Chr20: 35631625-35636238 Glycine max
Glyma.20G114700 0.5kb upstream 0.5kb upstream 500 false Chr20: 35635739-35636238 Glycine max
Glyma.20G114700 0.5kb downstream 0.5kb downstream 4614 true Chr20: 35631125-35635738 Glycine max
Glyma.20G114700 0.5kb downstream 0.5kb downstream 500 false Chr20: 35631125-35631624 Glycine max
Glyma.20G114700 1.0kb upstream 1.0kb upstream 5114 true Chr20: 35631625-35636738 Glycine max
Glyma.20G114700 1.0kb upstream 1.0kb upstream 1000 false Chr20: 35635739-35636738 Glycine max
Glyma.20G114700 1.0kb downstream 1.0kb downstream 5114 true Chr20: 35630625-35635738 Glycine max
Glyma.20G114700 1.0kb downstream 1.0kb downstream 1000 false Chr20: 35630625-35631624 Glycine max
Glyma.20G114700 2.0kb upstream 2.0kb upstream 6114 true Chr20: 35631625-35637738 Glycine max
Glyma.20G114700 2.0kb upstream 2.0kb upstream 2000 false Chr20: 35635739-35637738 Glycine max
Glyma.20G114700 2.0kb downstream 2.0kb downstream 6114 true Chr20: 35629625-35635738 Glycine max
Glyma.20G114700 2.0kb downstream 2.0kb downstream 2000 false Chr20: 35629625-35631624 Glycine max
Glyma.20G114700 5.0kb upstream 5.0kb upstream 9114 true Chr20: 35631625-35640738 Glycine max
Glyma.20G114700 5.0kb upstream 5.0kb upstream 5000 false Chr20: 35635739-35640738 Glycine max
Glyma.20G114700 5.0kb downstream 5.0kb downstream 9114 true Chr20: 35626625-35635738 Glycine max
Glyma.20G114700 5.0kb downstream 5.0kb downstream 5000 false Chr20: 35626625-35631624 Glycine max
Glyma.20G114700 10.0kb upstream 10.0kb upstream 14114 true Chr20: 35631625-35645738 Glycine max
Glyma.20G114700 10.0kb upstream 10.0kb upstream 10000 false Chr20: 35635739-35645738 Glycine max
Glyma.20G114700 10.0kb downstream 10.0kb downstream 14114 true Chr20: 35621625-35635738 Glycine max
Glyma.20G114700 10.0kb downstream 10.0kb downstream 10000 false Chr20: 35621625-35631624 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040911 5273 Angiosperm View MSA
122309404 5265 Fabidae View MSA
124061978 5270 Rosid View MSA
123736504 5271 Pentapetalae View MSA
122787573 5272 Eudicot View MSA
121350140 5274 Embryophyte View MSA
123423951 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 47.4321 0.0 199.838 High  
cufflinks 39.6447 0.0 125.339 High  
cufflinks 56.1017 0.0 215.011 High High
cufflinks 38.8618 0.0 145.846 High  
cufflinks 42.378 0.0 158.757 High  
cufflinks 39.8346 0.0 161.63 High  
cufflinks 53.3401 0.0 204.342 High High
cufflinks 38.0266 0.0 152.092 High Low
cufflinks 43.5853 0.0 162.701 High  
cufflinks 3.941        
cufflinks 5.917     High  
cufflinks 4.517        
cufflinks 3.884        
cufflinks 3.818        
cufflinks 5.443     High  
cufflinks 5.954        
cufflinks 3.301       Low
cufflinks 3.502       Low
cufflinks 4.701        
cufflinks 8.706     High High
cufflinks 4.496        
cufflinks 6.683       High
cufflinks 5.093        
cufflinks 5.963        
cufflinks 6.859       High
cufflinks 3.404       Low

0 Strain