Gene : Glyma.20G117400 G. max Wm82.a2.v1
Defline:  (1 of 14) PF07797 - Protein of unknown function (DUF1639) (DUF1639) Genomic Order:  1174
Name:  ? Glyma.20G117400 Secondary Identifier:  ? PAC:30522629
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G117400 0.5kb upstream 0.5kb upstream 3173 true Chr20: 36000507-36003679 Glycine max
Glyma.20G117400 0.5kb upstream 0.5kb upstream 500 false Chr20: 36003180-36003679 Glycine max
Glyma.20G117400 0.5kb downstream 0.5kb downstream 3173 true Chr20: 36000007-36003179 Glycine max
Glyma.20G117400 0.5kb downstream 0.5kb downstream 500 false Chr20: 36000007-36000506 Glycine max
Glyma.20G117400 1.0kb upstream 1.0kb upstream 3673 true Chr20: 36000507-36004179 Glycine max
Glyma.20G117400 1.0kb upstream 1.0kb upstream 1000 false Chr20: 36003180-36004179 Glycine max
Glyma.20G117400 1.0kb downstream 1.0kb downstream 3673 true Chr20: 35999507-36003179 Glycine max
Glyma.20G117400 1.0kb downstream 1.0kb downstream 1000 false Chr20: 35999507-36000506 Glycine max
Glyma.20G117400 2.0kb upstream 2.0kb upstream 4673 true Chr20: 36000507-36005179 Glycine max
Glyma.20G117400 2.0kb upstream 2.0kb upstream 2000 false Chr20: 36003180-36005179 Glycine max
Glyma.20G117400 2.0kb downstream 2.0kb downstream 4673 true Chr20: 35998507-36003179 Glycine max
Glyma.20G117400 2.0kb downstream 2.0kb downstream 2000 false Chr20: 35998507-36000506 Glycine max
Glyma.20G117400 5.0kb upstream 5.0kb upstream 7673 true Chr20: 36000507-36008179 Glycine max
Glyma.20G117400 5.0kb upstream 5.0kb upstream 5000 false Chr20: 36003180-36008179 Glycine max
Glyma.20G117400 5.0kb downstream 5.0kb downstream 7673 true Chr20: 35995507-36003179 Glycine max
Glyma.20G117400 5.0kb downstream 5.0kb downstream 5000 false Chr20: 35995507-36000506 Glycine max
Glyma.20G117400 10.0kb upstream 10.0kb upstream 12673 true Chr20: 36000507-36013179 Glycine max
Glyma.20G117400 10.0kb upstream 10.0kb upstream 10000 false Chr20: 36003180-36013179 Glycine max
Glyma.20G117400 10.0kb downstream 10.0kb downstream 12673 true Chr20: 35990507-36003179 Glycine max
Glyma.20G117400 10.0kb downstream 10.0kb downstream 10000 false Chr20: 35990507-36000506 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302966 5265 Fabidae View MSA
124073267 5270 Rosid View MSA
123753733 5271 Pentapetalae View MSA
122792020 5272 Eudicot View MSA
122049023 5273 Angiosperm View MSA
121351496 5274 Embryophyte View MSA
123382191 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.97814 0.0 9.73034    
cufflinks 2.02727 0.0 7.35992    
cufflinks 4.37149 0.0 16.6554   High
cufflinks 3.18234 0.0 9.84474    
cufflinks 2.44062 0.0 10.7636    
cufflinks 4.84743 0.0 17.0053   High
cufflinks 1.54672 0.0 5.81172   Low
cufflinks 3.36414 0.0 10.2588    
cufflinks 2.81416 0.0 12.2221    
cufflinks 1.04        
cufflinks 3.284       High
cufflinks 1.437        
cufflinks 0.682        
cufflinks 0.629        
cufflinks 1.638        
cufflinks 0.675        
cufflinks 2.028        
cufflinks 1.653        
cufflinks 0.923        
cufflinks 0.502       Low
cufflinks 1.787        
cufflinks 0.613       Low
cufflinks 0.759        
cufflinks 2.863       High
cufflinks 0.538       Low
cufflinks 2.517       High

0 Strain