Gene : Glyma.20G112200 G. max Wm82.a2.v1
Defline:  (1 of 2) PF03941 - Inner centromere protein, ARK binding region (INCENP_ARK-bind) Genomic Order:  1122
Name:  ? Glyma.20G112200 Secondary Identifier:  ? PAC:30521368
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G112200 0.5kb upstream 0.5kb upstream 9853 true Chr20: 35420674-35430526 Glycine max
Glyma.20G112200 0.5kb upstream 0.5kb upstream 500 false Chr20: 35430027-35430526 Glycine max
Glyma.20G112200 0.5kb downstream 0.5kb downstream 9853 true Chr20: 35420174-35430026 Glycine max
Glyma.20G112200 0.5kb downstream 0.5kb downstream 500 false Chr20: 35420174-35420673 Glycine max
Glyma.20G112200 1.0kb upstream 1.0kb upstream 10353 true Chr20: 35420674-35431026 Glycine max
Glyma.20G112200 1.0kb upstream 1.0kb upstream 1000 false Chr20: 35430027-35431026 Glycine max
Glyma.20G112200 1.0kb downstream 1.0kb downstream 10353 true Chr20: 35419674-35430026 Glycine max
Glyma.20G112200 1.0kb downstream 1.0kb downstream 1000 false Chr20: 35419674-35420673 Glycine max
Glyma.20G112200 2.0kb upstream 2.0kb upstream 11353 true Chr20: 35420674-35432026 Glycine max
Glyma.20G112200 2.0kb upstream 2.0kb upstream 2000 false Chr20: 35430027-35432026 Glycine max
Glyma.20G112200 2.0kb downstream 2.0kb downstream 11353 true Chr20: 35418674-35430026 Glycine max
Glyma.20G112200 2.0kb downstream 2.0kb downstream 2000 false Chr20: 35418674-35420673 Glycine max
Glyma.20G112200 5.0kb upstream 5.0kb upstream 14353 true Chr20: 35420674-35435026 Glycine max
Glyma.20G112200 5.0kb upstream 5.0kb upstream 5000 false Chr20: 35430027-35435026 Glycine max
Glyma.20G112200 5.0kb downstream 5.0kb downstream 14353 true Chr20: 35415674-35430026 Glycine max
Glyma.20G112200 5.0kb downstream 5.0kb downstream 5000 false Chr20: 35415674-35420673 Glycine max
Glyma.20G112200 10.0kb upstream 10.0kb upstream 19353 true Chr20: 35420674-35440026 Glycine max
Glyma.20G112200 10.0kb upstream 10.0kb upstream 10000 false Chr20: 35430027-35440026 Glycine max
Glyma.20G112200 10.0kb downstream 10.0kb downstream 19353 true Chr20: 35410674-35430026 Glycine max
Glyma.20G112200 10.0kb downstream 10.0kb downstream 10000 false Chr20: 35410674-35420673 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311189 5265 Fabidae View MSA
124060562 5270 Rosid View MSA
123741060 5271 Pentapetalae View MSA
122794023 5272 Eudicot View MSA
122049867 5273 Angiosperm View MSA
121311623 5274 Embryophyte View MSA
123348896 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.569147 0.0 2.04529    
cufflinks 2.47358 0.0 10.3354   High
cufflinks 0.306487 0.0 1.98213   Low
cufflinks 0.819176 0.0 3.57765    
cufflinks 2.00652 0.0 6.50262   High
cufflinks 0.919098 0.0 3.93869    
cufflinks 1.16023 0.0 4.34016    
cufflinks 0.662246 0.0 3.25325    
cufflinks 1.68887 0.0 6.86564    
cufflinks 0.407        
cufflinks 0.264        
cufflinks 0.355        
cufflinks 0.972        
cufflinks 0.995        
cufflinks 0.152       Low
cufflinks 1.272       High
cufflinks 0.125       Low
cufflinks 0.227        
cufflinks 1.306       High
cufflinks 1.039        
cufflinks 0.317        
cufflinks 1.248       High
cufflinks 1.391       High
cufflinks 0.253        
cufflinks 1.016        
cufflinks 0.256        

0 Strain