Gene : Glyma.20G104900 G. max Wm82.a2.v1
Defline:  (1 of 6) PF02373//PF10497 - JmjC domain, hydroxylase (JmjC) // Zinc-finger domain of monoamine-oxidase A repressor R1 (zf-4CXXC_R1) Genomic Order:  1049
Name:  ? Glyma.20G104900 Secondary Identifier:  ? PAC:30522396
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G104900 0.5kb upstream 0.5kb upstream 7627 true Chr20: 34706863-34714489 Glycine max
Glyma.20G104900 0.5kb upstream 0.5kb upstream 500 false Chr20: 34713990-34714489 Glycine max
Glyma.20G104900 0.5kb downstream 0.5kb downstream 7627 true Chr20: 34706363-34713989 Glycine max
Glyma.20G104900 0.5kb downstream 0.5kb downstream 500 false Chr20: 34706363-34706862 Glycine max
Glyma.20G104900 1.0kb upstream 1.0kb upstream 8127 true Chr20: 34706863-34714989 Glycine max
Glyma.20G104900 1.0kb upstream 1.0kb upstream 1000 false Chr20: 34713990-34714989 Glycine max
Glyma.20G104900 1.0kb downstream 1.0kb downstream 8127 true Chr20: 34705863-34713989 Glycine max
Glyma.20G104900 1.0kb downstream 1.0kb downstream 1000 false Chr20: 34705863-34706862 Glycine max
Glyma.20G104900 2.0kb upstream 2.0kb upstream 9127 true Chr20: 34706863-34715989 Glycine max
Glyma.20G104900 2.0kb upstream 2.0kb upstream 2000 false Chr20: 34713990-34715989 Glycine max
Glyma.20G104900 2.0kb downstream 2.0kb downstream 9127 true Chr20: 34704863-34713989 Glycine max
Glyma.20G104900 2.0kb downstream 2.0kb downstream 2000 false Chr20: 34704863-34706862 Glycine max
Glyma.20G104900 5.0kb upstream 5.0kb upstream 12127 true Chr20: 34706863-34718989 Glycine max
Glyma.20G104900 5.0kb upstream 5.0kb upstream 5000 false Chr20: 34713990-34718989 Glycine max
Glyma.20G104900 5.0kb downstream 5.0kb downstream 12127 true Chr20: 34701863-34713989 Glycine max
Glyma.20G104900 5.0kb downstream 5.0kb downstream 5000 false Chr20: 34701863-34706862 Glycine max
Glyma.20G104900 10.0kb upstream 10.0kb upstream 17127 true Chr20: 34706863-34723989 Glycine max
Glyma.20G104900 10.0kb upstream 10.0kb upstream 10000 false Chr20: 34713990-34723989 Glycine max
Glyma.20G104900 10.0kb downstream 10.0kb downstream 17127 true Chr20: 34696863-34713989 Glycine max
Glyma.20G104900 10.0kb downstream 10.0kb downstream 10000 false Chr20: 34696863-34706862 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314720 5265 Fabidae View MSA
124073545 5270 Rosid View MSA
123747808 5271 Pentapetalae View MSA
122796242 5272 Eudicot View MSA
122050393 5273 Angiosperm View MSA
121349542 5274 Embryophyte View MSA
123425923 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.98587 0.0 5.82899    
cufflinks 2.36134 0.0 6.77956   High
cufflinks 2.829 0.0 7.91951   High
cufflinks 1.49341 0.0 4.54482    
cufflinks 1.32891 0.0 4.1375    
cufflinks 0.76816 0.0 2.57382   Low
cufflinks 1.48995 0.0 4.56678    
cufflinks 1.07558 0.0 3.43755    
cufflinks 1.40673 0.0 4.3348    
cufflinks 0.838        
cufflinks 0.936        
cufflinks 2.889       High
cufflinks 1.002        
cufflinks 1.278        
cufflinks 1.939        
cufflinks 2.143        
cufflinks 0.554       Low
cufflinks 2.436        
cufflinks 2.873       High
cufflinks 1.968        
cufflinks 0.658       Low
cufflinks 2.194        
cufflinks 2.433        
cufflinks 0.753       Low
cufflinks 2.239        
cufflinks 0.722       Low

0 Strain