Gene : Glyma.20G136800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11945//PTHR11945:SF164 - MADS BOX PROTEIN Genomic Order:  1368
Name:  ? Glyma.20G136800 Secondary Identifier:  ? PAC:30520404
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G136800 0.5kb upstream 0.5kb upstream 2244 true Chr20: 37645528-37647771 Glycine max
Glyma.20G136800 0.5kb upstream 0.5kb upstream 500 false Chr20: 37645528-37646027 Glycine max
Glyma.20G136800 0.5kb downstream 0.5kb downstream 2244 true Chr20: 37646028-37648271 Glycine max
Glyma.20G136800 0.5kb downstream 0.5kb downstream 500 false Chr20: 37647772-37648271 Glycine max
Glyma.20G136800 1.0kb upstream 1.0kb upstream 2744 true Chr20: 37645028-37647771 Glycine max
Glyma.20G136800 1.0kb upstream 1.0kb upstream 1000 false Chr20: 37645028-37646027 Glycine max
Glyma.20G136800 1.0kb downstream 1.0kb downstream 2744 true Chr20: 37646028-37648771 Glycine max
Glyma.20G136800 1.0kb downstream 1.0kb downstream 1000 false Chr20: 37647772-37648771 Glycine max
Glyma.20G136800 2.0kb upstream 2.0kb upstream 3744 true Chr20: 37644028-37647771 Glycine max
Glyma.20G136800 2.0kb upstream 2.0kb upstream 2000 false Chr20: 37644028-37646027 Glycine max
Glyma.20G136800 2.0kb downstream 2.0kb downstream 3744 true Chr20: 37646028-37649771 Glycine max
Glyma.20G136800 2.0kb downstream 2.0kb downstream 2000 false Chr20: 37647772-37649771 Glycine max
Glyma.20G136800 5.0kb upstream 5.0kb upstream 6744 true Chr20: 37641028-37647771 Glycine max
Glyma.20G136800 5.0kb upstream 5.0kb upstream 5000 false Chr20: 37641028-37646027 Glycine max
Glyma.20G136800 5.0kb downstream 5.0kb downstream 6744 true Chr20: 37646028-37652771 Glycine max
Glyma.20G136800 5.0kb downstream 5.0kb downstream 5000 false Chr20: 37647772-37652771 Glycine max
Glyma.20G136800 10.0kb upstream 10.0kb upstream 11744 true Chr20: 37636028-37647771 Glycine max
Glyma.20G136800 10.0kb upstream 10.0kb upstream 10000 false Chr20: 37636028-37646027 Glycine max
Glyma.20G136800 10.0kb downstream 10.0kb downstream 11744 true Chr20: 37646028-37657771 Glycine max
Glyma.20G136800 10.0kb downstream 10.0kb downstream 10000 false Chr20: 37647772-37657771 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311915 5265 Fabidae View MSA
124073225 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain