Gene : Glyma.20G131300 G. max Wm82.a2.v1
Defline:  (1 of 19) PF04788 - Protein of unknown function (DUF620) (DUF620) Genomic Order:  1313
Name:  ? Glyma.20G131300 Secondary Identifier:  ? PAC:30522961
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G131300 0.5kb upstream 0.5kb upstream 3541 true Chr20: 37198807-37202347 Glycine max
Glyma.20G131300 0.5kb upstream 0.5kb upstream 500 false Chr20: 37198807-37199306 Glycine max
Glyma.20G131300 0.5kb downstream 0.5kb downstream 3541 true Chr20: 37199307-37202847 Glycine max
Glyma.20G131300 0.5kb downstream 0.5kb downstream 500 false Chr20: 37202348-37202847 Glycine max
Glyma.20G131300 1.0kb upstream 1.0kb upstream 4041 true Chr20: 37198307-37202347 Glycine max
Glyma.20G131300 1.0kb upstream 1.0kb upstream 1000 false Chr20: 37198307-37199306 Glycine max
Glyma.20G131300 1.0kb downstream 1.0kb downstream 4041 true Chr20: 37199307-37203347 Glycine max
Glyma.20G131300 1.0kb downstream 1.0kb downstream 1000 false Chr20: 37202348-37203347 Glycine max
Glyma.20G131300 2.0kb upstream 2.0kb upstream 5041 true Chr20: 37197307-37202347 Glycine max
Glyma.20G131300 2.0kb upstream 2.0kb upstream 2000 false Chr20: 37197307-37199306 Glycine max
Glyma.20G131300 2.0kb downstream 2.0kb downstream 5041 true Chr20: 37199307-37204347 Glycine max
Glyma.20G131300 2.0kb downstream 2.0kb downstream 2000 false Chr20: 37202348-37204347 Glycine max
Glyma.20G131300 5.0kb upstream 5.0kb upstream 8041 true Chr20: 37194307-37202347 Glycine max
Glyma.20G131300 5.0kb upstream 5.0kb upstream 5000 false Chr20: 37194307-37199306 Glycine max
Glyma.20G131300 5.0kb downstream 5.0kb downstream 8041 true Chr20: 37199307-37207347 Glycine max
Glyma.20G131300 5.0kb downstream 5.0kb downstream 5000 false Chr20: 37202348-37207347 Glycine max
Glyma.20G131300 10.0kb upstream 10.0kb upstream 13041 true Chr20: 37189307-37202347 Glycine max
Glyma.20G131300 10.0kb upstream 10.0kb upstream 10000 false Chr20: 37189307-37199306 Glycine max
Glyma.20G131300 10.0kb downstream 10.0kb downstream 13041 true Chr20: 37199307-37212347 Glycine max
Glyma.20G131300 10.0kb downstream 10.0kb downstream 10000 false Chr20: 37202348-37212347 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299033 5265 Fabidae View MSA
124061371 5270 Rosid View MSA
123742255 5271 Pentapetalae View MSA
122789434 5272 Eudicot View MSA
122043427 5273 Angiosperm View MSA
121310121 5274 Embryophyte View MSA
123347696 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.35892 0.0 17.4293    
cufflinks 15.9692 0.0 42.6666   High
cufflinks 3.44651 0.0 10.0795   Low
cufflinks 12.391 0.0 33.0682    
cufflinks 8.68891 0.0 23.3775    
cufflinks 3.75334 0.0 10.8318   Low
cufflinks 11.1818 0.0 29.8783    
cufflinks 18.9689 0.0 50.9495   High
cufflinks 8.90819 0.0 23.9547    
cufflinks 16.732     High High
cufflinks 0.557       Low
cufflinks 3.97        
cufflinks 8.148     High  
cufflinks 7.288     High  
cufflinks 0.895       Low
cufflinks 8.541     High  
cufflinks 1.232        
cufflinks 5.044        
cufflinks 14.877     High High
cufflinks 6.378        
cufflinks 0.607       Low
cufflinks 7.79     High  
cufflinks 14.593     High High
cufflinks 0.581       Low
cufflinks 6.792        
cufflinks 0.935       Low

0 Strain