Gene : Glyma.20G129900 G. max Wm82.a2.v1
Defline:  (1 of 7) PF04450 - Peptidase of plants and bacteria (BSP) Genomic Order:  1299
Name:  ? Glyma.20G129900 Secondary Identifier:  ? PAC:30521135
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G129900 0.5kb upstream 0.5kb upstream 1799 true Chr20: 37091399-37093197 Glycine max
Glyma.20G129900 0.5kb upstream 0.5kb upstream 500 false Chr20: 37092698-37093197 Glycine max
Glyma.20G129900 0.5kb downstream 0.5kb downstream 1799 true Chr20: 37090899-37092697 Glycine max
Glyma.20G129900 0.5kb downstream 0.5kb downstream 500 false Chr20: 37090899-37091398 Glycine max
Glyma.20G129900 1.0kb upstream 1.0kb upstream 2299 true Chr20: 37091399-37093697 Glycine max
Glyma.20G129900 1.0kb upstream 1.0kb upstream 1000 false Chr20: 37092698-37093697 Glycine max
Glyma.20G129900 1.0kb downstream 1.0kb downstream 2299 true Chr20: 37090399-37092697 Glycine max
Glyma.20G129900 1.0kb downstream 1.0kb downstream 1000 false Chr20: 37090399-37091398 Glycine max
Glyma.20G129900 2.0kb upstream 2.0kb upstream 3299 true Chr20: 37091399-37094697 Glycine max
Glyma.20G129900 2.0kb upstream 2.0kb upstream 2000 false Chr20: 37092698-37094697 Glycine max
Glyma.20G129900 2.0kb downstream 2.0kb downstream 3299 true Chr20: 37089399-37092697 Glycine max
Glyma.20G129900 2.0kb downstream 2.0kb downstream 2000 false Chr20: 37089399-37091398 Glycine max
Glyma.20G129900 5.0kb upstream 5.0kb upstream 6299 true Chr20: 37091399-37097697 Glycine max
Glyma.20G129900 5.0kb upstream 5.0kb upstream 5000 false Chr20: 37092698-37097697 Glycine max
Glyma.20G129900 5.0kb downstream 5.0kb downstream 6299 true Chr20: 37086399-37092697 Glycine max
Glyma.20G129900 5.0kb downstream 5.0kb downstream 5000 false Chr20: 37086399-37091398 Glycine max
Glyma.20G129900 10.0kb upstream 10.0kb upstream 11299 true Chr20: 37091399-37102697 Glycine max
Glyma.20G129900 10.0kb upstream 10.0kb upstream 10000 false Chr20: 37092698-37102697 Glycine max
Glyma.20G129900 10.0kb downstream 10.0kb downstream 11299 true Chr20: 37081399-37092697 Glycine max
Glyma.20G129900 10.0kb downstream 10.0kb downstream 10000 false Chr20: 37081399-37091398 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254195 5265 Fabidae View MSA
124062491 5270 Rosid View MSA
123748225 5271 Pentapetalae View MSA
122793503 5272 Eudicot View MSA
122049150 5273 Angiosperm View MSA
121350945 5274 Embryophyte View MSA
123381943 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.6174 0.0 55.1917    
cufflinks 1.29495 0.0 4.62674    
cufflinks 199.327 0.0 665.2 High High
cufflinks 0.979717 0.0 3.56203    
cufflinks 5.2663 0.0 15.9747    
cufflinks 41.5281 0.0 111.957 High  
cufflinks 0.142919 0.0 0.566476 Low Low
cufflinks 2.07746 0.0 7.1235    
cufflinks 5.01361 0.0 15.2975    
cufflinks 11.485     High  
cufflinks 28.66     High  
cufflinks 93.808     High High
cufflinks 9.298     High  
cufflinks 0.472       Low
cufflinks 0.699       Low
cufflinks 5.016        
cufflinks 26.419     High  
cufflinks 3.354        
cufflinks 4.364        
cufflinks 4.41        
cufflinks 10.447     High  
cufflinks 18.279     High  
cufflinks 9.482     High  
cufflinks 73.574     High High
cufflinks 3.934        
cufflinks 47.777     High High

0 Strain