Gene : Glyma.20G130000 G. max Wm82.a2.v1
Defline:  (1 of 7) PF04450 - Peptidase of plants and bacteria (BSP) Genomic Order:  1300
Name:  ? Glyma.20G130000 Secondary Identifier:  ? PAC:30521522
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G130000 0.5kb upstream 0.5kb upstream 1413 true Chr20: 37095050-37096462 Glycine max
Glyma.20G130000 0.5kb upstream 0.5kb upstream 500 false Chr20: 37095963-37096462 Glycine max
Glyma.20G130000 0.5kb downstream 0.5kb downstream 1413 true Chr20: 37094550-37095962 Glycine max
Glyma.20G130000 0.5kb downstream 0.5kb downstream 500 false Chr20: 37094550-37095049 Glycine max
Glyma.20G130000 1.0kb upstream 1.0kb upstream 1913 true Chr20: 37095050-37096962 Glycine max
Glyma.20G130000 1.0kb upstream 1.0kb upstream 1000 false Chr20: 37095963-37096962 Glycine max
Glyma.20G130000 1.0kb downstream 1.0kb downstream 1913 true Chr20: 37094050-37095962 Glycine max
Glyma.20G130000 1.0kb downstream 1.0kb downstream 1000 false Chr20: 37094050-37095049 Glycine max
Glyma.20G130000 2.0kb upstream 2.0kb upstream 2913 true Chr20: 37095050-37097962 Glycine max
Glyma.20G130000 2.0kb upstream 2.0kb upstream 2000 false Chr20: 37095963-37097962 Glycine max
Glyma.20G130000 2.0kb downstream 2.0kb downstream 2913 true Chr20: 37093050-37095962 Glycine max
Glyma.20G130000 2.0kb downstream 2.0kb downstream 2000 false Chr20: 37093050-37095049 Glycine max
Glyma.20G130000 5.0kb upstream 5.0kb upstream 5913 true Chr20: 37095050-37100962 Glycine max
Glyma.20G130000 5.0kb upstream 5.0kb upstream 5000 false Chr20: 37095963-37100962 Glycine max
Glyma.20G130000 5.0kb downstream 5.0kb downstream 5913 true Chr20: 37090050-37095962 Glycine max
Glyma.20G130000 5.0kb downstream 5.0kb downstream 5000 false Chr20: 37090050-37095049 Glycine max
Glyma.20G130000 10.0kb upstream 10.0kb upstream 10913 true Chr20: 37095050-37105962 Glycine max
Glyma.20G130000 10.0kb upstream 10.0kb upstream 10000 false Chr20: 37095963-37105962 Glycine max
Glyma.20G130000 10.0kb downstream 10.0kb downstream 10913 true Chr20: 37085050-37095962 Glycine max
Glyma.20G130000 10.0kb downstream 10.0kb downstream 10000 false Chr20: 37085050-37095049 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314822 5265 Fabidae View MSA
124062491 5270 Rosid View MSA
123748225 5271 Pentapetalae View MSA
122793503 5272 Eudicot View MSA
122049150 5273 Angiosperm View MSA
121350945 5274 Embryophyte View MSA
123381943 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.75627 0.0 6.27427    
cufflinks 0.583154 0.0 2.21219    
cufflinks 102.452 0.0 290.428 High High
cufflinks 0.304478 0.0 1.18653   Low
cufflinks 5.00426 0.0 15.9541    
cufflinks 26.6687 0.0 71.5138 High  
cufflinks 8.079 0.0 24.0435    
cufflinks 0.316737 0.0 1.23284   Low
cufflinks 10.0338 0.0 29.0832    
cufflinks 0.136        
cufflinks 84.328     High High
cufflinks 87.052     High High
cufflinks 0.071     Low  
cufflinks 0.634        
cufflinks 0.168        
cufflinks 0.036     Low Low
cufflinks 18.725     High  
cufflinks 0.346        
cufflinks 1.801        
cufflinks 0.019     Low Low
cufflinks 31.824     High High
cufflinks 0.543        
cufflinks 0.257        
cufflinks 149.681     High High
cufflinks 0.016     Low Low
cufflinks 33.292     High High

0 Strain