Gene : Glyma.20G165200 G. max Wm82.a2.v1
Genomic Order:  1652 Name:  ? Glyma.20G165200
Secondary Identifier:  ? PAC:30520923
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G165200 0.5kb upstream 0.5kb upstream 3903 true Chr20: 40267892-40271794 Glycine max
Glyma.20G165200 0.5kb upstream 0.5kb upstream 500 false Chr20: 40271295-40271794 Glycine max
Glyma.20G165200 0.5kb downstream 0.5kb downstream 3903 true Chr20: 40267392-40271294 Glycine max
Glyma.20G165200 0.5kb downstream 0.5kb downstream 500 false Chr20: 40267392-40267891 Glycine max
Glyma.20G165200 1.0kb upstream 1.0kb upstream 4403 true Chr20: 40267892-40272294 Glycine max
Glyma.20G165200 1.0kb upstream 1.0kb upstream 1000 false Chr20: 40271295-40272294 Glycine max
Glyma.20G165200 1.0kb downstream 1.0kb downstream 4403 true Chr20: 40266892-40271294 Glycine max
Glyma.20G165200 1.0kb downstream 1.0kb downstream 1000 false Chr20: 40266892-40267891 Glycine max
Glyma.20G165200 2.0kb upstream 2.0kb upstream 5403 true Chr20: 40267892-40273294 Glycine max
Glyma.20G165200 2.0kb upstream 2.0kb upstream 2000 false Chr20: 40271295-40273294 Glycine max
Glyma.20G165200 2.0kb downstream 2.0kb downstream 5403 true Chr20: 40265892-40271294 Glycine max
Glyma.20G165200 2.0kb downstream 2.0kb downstream 2000 false Chr20: 40265892-40267891 Glycine max
Glyma.20G165200 5.0kb upstream 5.0kb upstream 8403 true Chr20: 40267892-40276294 Glycine max
Glyma.20G165200 5.0kb upstream 5.0kb upstream 5000 false Chr20: 40271295-40276294 Glycine max
Glyma.20G165200 5.0kb downstream 5.0kb downstream 8403 true Chr20: 40262892-40271294 Glycine max
Glyma.20G165200 5.0kb downstream 5.0kb downstream 5000 false Chr20: 40262892-40267891 Glycine max
Glyma.20G165200 10.0kb upstream 10.0kb upstream 13403 true Chr20: 40267892-40281294 Glycine max
Glyma.20G165200 10.0kb upstream 10.0kb upstream 10000 false Chr20: 40271295-40281294 Glycine max
Glyma.20G165200 10.0kb downstream 10.0kb downstream 13403 true Chr20: 40257892-40271294 Glycine max
Glyma.20G165200 10.0kb downstream 10.0kb downstream 10000 false Chr20: 40257892-40267891 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314940 5265 Fabidae View MSA
124050819 5270 Rosid View MSA
123744340 5271 Pentapetalae View MSA
122794905 5272 Eudicot View MSA
122051166 5273 Angiosperm View MSA
121312323 5274 Embryophyte View MSA
123349506 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.86948 0.0 9.18339    
cufflinks 3.79438 0.0 14.8247    
cufflinks 1.83395 0.0 8.8808    
cufflinks 4.43251 0.0 22.1317    
cufflinks 1.53994 0.0 7.98635    
cufflinks 0.426154 0.0 2.73409   Low
cufflinks 5.11554 0.0 18.4435   High
cufflinks 2.3508 0.0 15.5781    
cufflinks 2.49559 0.0 11.2077    
cufflinks 0.18        
cufflinks 0.017     Low Low
cufflinks 0.553        
cufflinks 0.189        
cufflinks 0.264        
cufflinks 0.107        
cufflinks 0.445        
cufflinks 0.015     Low Low
cufflinks 0.671        
cufflinks 0.572        
cufflinks 0.549        
cufflinks 0.016     Low Low
cufflinks 0.571        
cufflinks 0.551        
cufflinks 0.019     Low Low
cufflinks 0.605        
cufflinks 0.028     Low Low

0 Strain