Gene : Glyma.20G168100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11363:SF6 - 60S RIBOSOMAL PROTEIN L3-2 Genomic Order:  1681
Name:  ? Glyma.20G168100 Secondary Identifier:  ? PAC:30520618
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G168100 0.5kb upstream 0.5kb upstream 18325 true Chr20: 40589132-40607456 Glycine max
Glyma.20G168100 0.5kb upstream 0.5kb upstream 500 false Chr20: 40589132-40589631 Glycine max
Glyma.20G168100 0.5kb downstream 0.5kb downstream 18325 true Chr20: 40589632-40607956 Glycine max
Glyma.20G168100 0.5kb downstream 0.5kb downstream 500 false Chr20: 40607457-40607956 Glycine max
Glyma.20G168100 1.0kb upstream 1.0kb upstream 18825 true Chr20: 40588632-40607456 Glycine max
Glyma.20G168100 1.0kb upstream 1.0kb upstream 1000 false Chr20: 40588632-40589631 Glycine max
Glyma.20G168100 1.0kb downstream 1.0kb downstream 18825 true Chr20: 40589632-40608456 Glycine max
Glyma.20G168100 1.0kb downstream 1.0kb downstream 1000 false Chr20: 40607457-40608456 Glycine max
Glyma.20G168100 2.0kb upstream 2.0kb upstream 19825 true Chr20: 40587632-40607456 Glycine max
Glyma.20G168100 2.0kb upstream 2.0kb upstream 2000 false Chr20: 40587632-40589631 Glycine max
Glyma.20G168100 2.0kb downstream 2.0kb downstream 19825 true Chr20: 40589632-40609456 Glycine max
Glyma.20G168100 2.0kb downstream 2.0kb downstream 2000 false Chr20: 40607457-40609456 Glycine max
Glyma.20G168100 5.0kb upstream 5.0kb upstream 22825 true Chr20: 40584632-40607456 Glycine max
Glyma.20G168100 5.0kb upstream 5.0kb upstream 5000 false Chr20: 40584632-40589631 Glycine max
Glyma.20G168100 5.0kb downstream 5.0kb downstream 22825 true Chr20: 40589632-40612456 Glycine max
Glyma.20G168100 5.0kb downstream 5.0kb downstream 5000 false Chr20: 40607457-40612456 Glycine max
Glyma.20G168100 10.0kb upstream 10.0kb upstream 27825 true Chr20: 40579632-40607456 Glycine max
Glyma.20G168100 10.0kb upstream 10.0kb upstream 10000 false Chr20: 40579632-40589631 Glycine max
Glyma.20G168100 10.0kb downstream 10.0kb downstream 27825 true Chr20: 40589632-40617456 Glycine max
Glyma.20G168100 10.0kb downstream 10.0kb downstream 10000 false Chr20: 40607457-40617456 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310538 5265 Fabidae View MSA
124066919 5270 Rosid View MSA
123741498 5271 Pentapetalae View MSA
122796650 5272 Eudicot View MSA
122047295 5273 Angiosperm View MSA
121345425 5274 Embryophyte View MSA
123426752 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 129.259 0.0 570.757 High  
cufflinks 169.205 0.0 953.504 High  
cufflinks 72.5542 0.0 262.625 High Low
cufflinks 158.987 0.0 817.172 High  
cufflinks 273.102 0.0 1920.5 High  
cufflinks 157.931 0.0 777.559 High  
cufflinks 408.639 0.0 4169.92 High High
cufflinks 171.711 0.0 955.803 High  
cufflinks 175.98 0.0 921.203 High  
cufflinks 15.048     High  
cufflinks 1.982       Low
cufflinks 12.27     High  
cufflinks 30.301     High High
cufflinks 41.323     High High
cufflinks 3.482       Low
cufflinks 11.822     High  
cufflinks 8.302     High  
cufflinks 13.395     High  
cufflinks 16.189     High  
cufflinks 8.321     High  
cufflinks 4.775        
cufflinks 8.89     High  
cufflinks 13.371     High  
cufflinks 3.15       Low
cufflinks 10.743     High  
cufflinks 6.836     High  

0 Strain