Gene : Glyma.20G168400 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR24012:SF376 - POLYPYRIMIDINE TRACT-BINDING PROTEIN 3 Genomic Order:  1684
Name:  ? Glyma.20G168400 Secondary Identifier:  ? PAC:30520571
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G168400 0.5kb upstream 0.5kb upstream 8403 true Chr20: 40608866-40617268 Glycine max
Glyma.20G168400 0.5kb upstream 0.5kb upstream 500 false Chr20: 40608866-40609365 Glycine max
Glyma.20G168400 0.5kb downstream 0.5kb downstream 8403 true Chr20: 40609366-40617768 Glycine max
Glyma.20G168400 0.5kb downstream 0.5kb downstream 500 false Chr20: 40617269-40617768 Glycine max
Glyma.20G168400 1.0kb upstream 1.0kb upstream 8903 true Chr20: 40608366-40617268 Glycine max
Glyma.20G168400 1.0kb upstream 1.0kb upstream 1000 false Chr20: 40608366-40609365 Glycine max
Glyma.20G168400 1.0kb downstream 1.0kb downstream 8903 true Chr20: 40609366-40618268 Glycine max
Glyma.20G168400 1.0kb downstream 1.0kb downstream 1000 false Chr20: 40617269-40618268 Glycine max
Glyma.20G168400 2.0kb upstream 2.0kb upstream 9903 true Chr20: 40607366-40617268 Glycine max
Glyma.20G168400 2.0kb upstream 2.0kb upstream 2000 false Chr20: 40607366-40609365 Glycine max
Glyma.20G168400 2.0kb downstream 2.0kb downstream 9903 true Chr20: 40609366-40619268 Glycine max
Glyma.20G168400 2.0kb downstream 2.0kb downstream 2000 false Chr20: 40617269-40619268 Glycine max
Glyma.20G168400 5.0kb upstream 5.0kb upstream 12903 true Chr20: 40604366-40617268 Glycine max
Glyma.20G168400 5.0kb upstream 5.0kb upstream 5000 false Chr20: 40604366-40609365 Glycine max
Glyma.20G168400 5.0kb downstream 5.0kb downstream 12903 true Chr20: 40609366-40622268 Glycine max
Glyma.20G168400 5.0kb downstream 5.0kb downstream 5000 false Chr20: 40617269-40622268 Glycine max
Glyma.20G168400 10.0kb upstream 10.0kb upstream 17903 true Chr20: 40599366-40617268 Glycine max
Glyma.20G168400 10.0kb upstream 10.0kb upstream 10000 false Chr20: 40599366-40609365 Glycine max
Glyma.20G168400 10.0kb downstream 10.0kb downstream 17903 true Chr20: 40609366-40627268 Glycine max
Glyma.20G168400 10.0kb downstream 10.0kb downstream 10000 false Chr20: 40617269-40627268 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302382 5265 Fabidae View MSA
124066060 5270 Rosid View MSA
123747160 5271 Pentapetalae View MSA
122792430 5272 Eudicot View MSA
122046546 5273 Angiosperm View MSA
121348695 5274 Embryophyte View MSA
123380977 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.3968 0.0 81.8886 High  
cufflinks 25.0666 0.0 98.9384 High  
cufflinks 25.2243 0.0 99.6396 High  
cufflinks 15.8334 0.0 60.634    
cufflinks 14.7646 0.0 56.2323   Low
cufflinks 37.4174 0.0 139.752 High High
cufflinks 16.695 0.0 63.5154    
cufflinks 16.7936 0.0 58.5503    
cufflinks 15.8686 0.0 54.3031    
cufflinks 1.228        
cufflinks 1.304        
cufflinks 2.159        
cufflinks 1.54        
cufflinks 1.584        
cufflinks 1.306        
cufflinks 2.302        
cufflinks 1.041       Low
cufflinks 1.832        
cufflinks 1.976        
cufflinks 2.906       High
cufflinks 0.965       Low
cufflinks 2.432       High
cufflinks 2.405       High
cufflinks 1.214        
cufflinks 2.673       High
cufflinks 0.91       Low

0 Strain