Gene : Glyma.20G158200 G. max Wm82.a2.v1
Defline:  (1 of 8) PF03766 - Remorin, N-terminal region (Remorin_N) Genomic Order:  1582
Name:  ? Glyma.20G158200 Secondary Identifier:  ? PAC:30522770
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G158200 0.5kb upstream 0.5kb upstream 3475 true Chr20: 39682732-39686206 Glycine max
Glyma.20G158200 0.5kb upstream 0.5kb upstream 500 false Chr20: 39685707-39686206 Glycine max
Glyma.20G158200 0.5kb downstream 0.5kb downstream 3475 true Chr20: 39682232-39685706 Glycine max
Glyma.20G158200 0.5kb downstream 0.5kb downstream 500 false Chr20: 39682232-39682731 Glycine max
Glyma.20G158200 1.0kb upstream 1.0kb upstream 3975 true Chr20: 39682732-39686706 Glycine max
Glyma.20G158200 1.0kb upstream 1.0kb upstream 1000 false Chr20: 39685707-39686706 Glycine max
Glyma.20G158200 1.0kb downstream 1.0kb downstream 3975 true Chr20: 39681732-39685706 Glycine max
Glyma.20G158200 1.0kb downstream 1.0kb downstream 1000 false Chr20: 39681732-39682731 Glycine max
Glyma.20G158200 2.0kb upstream 2.0kb upstream 4975 true Chr20: 39682732-39687706 Glycine max
Glyma.20G158200 2.0kb upstream 2.0kb upstream 2000 false Chr20: 39685707-39687706 Glycine max
Glyma.20G158200 2.0kb downstream 2.0kb downstream 4975 true Chr20: 39680732-39685706 Glycine max
Glyma.20G158200 2.0kb downstream 2.0kb downstream 2000 false Chr20: 39680732-39682731 Glycine max
Glyma.20G158200 5.0kb upstream 5.0kb upstream 7975 true Chr20: 39682732-39690706 Glycine max
Glyma.20G158200 5.0kb upstream 5.0kb upstream 5000 false Chr20: 39685707-39690706 Glycine max
Glyma.20G158200 5.0kb downstream 5.0kb downstream 7975 true Chr20: 39677732-39685706 Glycine max
Glyma.20G158200 5.0kb downstream 5.0kb downstream 5000 false Chr20: 39677732-39682731 Glycine max
Glyma.20G158200 10.0kb upstream 10.0kb upstream 12975 true Chr20: 39682732-39695706 Glycine max
Glyma.20G158200 10.0kb upstream 10.0kb upstream 10000 false Chr20: 39685707-39695706 Glycine max
Glyma.20G158200 10.0kb downstream 10.0kb downstream 12975 true Chr20: 39672732-39685706 Glycine max
Glyma.20G158200 10.0kb downstream 10.0kb downstream 10000 false Chr20: 39672732-39682731 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254974 5265 Fabidae View MSA
124068880 5270 Rosid View MSA
123745750 5271 Pentapetalae View MSA
122789857 5272 Eudicot View MSA
122045741 5273 Angiosperm View MSA
121351512 5274 Embryophyte View MSA
123382200 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.32331 0.0 4.7297    
cufflinks 2.0246 0.0 6.98265    
cufflinks 1.74671 0.0 6.09102    
cufflinks 4.9023 0.0 15.0029   High
cufflinks 0.80445 0.0 2.9656   Low
cufflinks 3.06806 0.0 10.0829    
cufflinks 2.5623 0.0 8.6368    
cufflinks 7.3096 0.0 21.1985   High
cufflinks 1.52225 0.0 5.37962    
cufflinks 0.964        
cufflinks 0.24        
cufflinks 0.606        
cufflinks 0.161        
cufflinks 0.033     Low Low
cufflinks 0.045     Low Low
cufflinks 1.285        
cufflinks 0.842        
cufflinks 1.327        
cufflinks 0.782        
cufflinks 2.132       High
cufflinks 0.346        
cufflinks 1.993       High
cufflinks 1.564        
cufflinks 0.211        
cufflinks 1.964       High
cufflinks 0.231        

0 Strain