Gene : Glyma.20G159400 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR33649:SF2 - PAR1 PROTEIN Genomic Order:  1594
Name:  ? Glyma.20G159400 Secondary Identifier:  ? PAC:30521234
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G159400 0.5kb upstream 0.5kb upstream 2495 true Chr20: 39770049-39772543 Glycine max
Glyma.20G159400 0.5kb upstream 0.5kb upstream 500 false Chr20: 39772044-39772543 Glycine max
Glyma.20G159400 0.5kb downstream 0.5kb downstream 2495 true Chr20: 39769549-39772043 Glycine max
Glyma.20G159400 0.5kb downstream 0.5kb downstream 500 false Chr20: 39769549-39770048 Glycine max
Glyma.20G159400 1.0kb upstream 1.0kb upstream 2995 true Chr20: 39770049-39773043 Glycine max
Glyma.20G159400 1.0kb upstream 1.0kb upstream 1000 false Chr20: 39772044-39773043 Glycine max
Glyma.20G159400 1.0kb downstream 1.0kb downstream 2995 true Chr20: 39769049-39772043 Glycine max
Glyma.20G159400 1.0kb downstream 1.0kb downstream 1000 false Chr20: 39769049-39770048 Glycine max
Glyma.20G159400 2.0kb upstream 2.0kb upstream 3995 true Chr20: 39770049-39774043 Glycine max
Glyma.20G159400 2.0kb upstream 2.0kb upstream 2000 false Chr20: 39772044-39774043 Glycine max
Glyma.20G159400 2.0kb downstream 2.0kb downstream 3995 true Chr20: 39768049-39772043 Glycine max
Glyma.20G159400 2.0kb downstream 2.0kb downstream 2000 false Chr20: 39768049-39770048 Glycine max
Glyma.20G159400 5.0kb upstream 5.0kb upstream 6995 true Chr20: 39770049-39777043 Glycine max
Glyma.20G159400 5.0kb upstream 5.0kb upstream 5000 false Chr20: 39772044-39777043 Glycine max
Glyma.20G159400 5.0kb downstream 5.0kb downstream 6995 true Chr20: 39765049-39772043 Glycine max
Glyma.20G159400 5.0kb downstream 5.0kb downstream 5000 false Chr20: 39765049-39770048 Glycine max
Glyma.20G159400 10.0kb upstream 10.0kb upstream 11995 true Chr20: 39770049-39782043 Glycine max
Glyma.20G159400 10.0kb upstream 10.0kb upstream 10000 false Chr20: 39772044-39782043 Glycine max
Glyma.20G159400 10.0kb downstream 10.0kb downstream 11995 true Chr20: 39760049-39772043 Glycine max
Glyma.20G159400 10.0kb downstream 10.0kb downstream 10000 false Chr20: 39760049-39770048 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311543 5265 Fabidae View MSA
124062398 5270 Rosid View MSA
123740703 5271 Pentapetalae View MSA
122795760 5272 Eudicot View MSA
122048533 5273 Angiosperm View MSA
121349553 5274 Embryophyte View MSA
123381353 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.28362 0.0 16.5847    
cufflinks 0.044283 0.0 0.189147 Low Low
cufflinks 22.5515 0.0 60.6058 High High
cufflinks 1.96774 0.0 6.92467    
cufflinks 1.52279 0.0 5.46232    
cufflinks 1.72273 0.0 6.13299    
cufflinks 0.162464 0.0 0.646671 Low Low
cufflinks 26.8524 0.0 71.7673 High High
cufflinks 2.16549 0.0 7.55513    
cufflinks 0.23        
cufflinks 0.532        
cufflinks 7.495     High High
cufflinks 0.071     Low  
cufflinks 0.039     Low  
cufflinks 0.019     Low Low
cufflinks 0.01     Low Low
cufflinks 1.94       High
cufflinks 0.153        
cufflinks 0.36        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.437        
cufflinks 0.022     Low Low
cufflinks 0.133        
cufflinks 1.225        
cufflinks 0.015     Low Low
cufflinks 0.906        

0 Strain