Gene : Glyma.20G154100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR21726:SF51 - GENOMIC DNA, CHROMOSOME 5, P1 CLONE:MTG10 Genomic Order:  1541
Name:  ? Glyma.20G154100 Secondary Identifier:  ? PAC:30520193
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G154100 0.5kb upstream 0.5kb upstream 5741 true Chr20: 39297759-39303499 Glycine max
Glyma.20G154100 0.5kb upstream 0.5kb upstream 500 false Chr20: 39303000-39303499 Glycine max
Glyma.20G154100 0.5kb downstream 0.5kb downstream 5741 true Chr20: 39297259-39302999 Glycine max
Glyma.20G154100 0.5kb downstream 0.5kb downstream 500 false Chr20: 39297259-39297758 Glycine max
Glyma.20G154100 1.0kb upstream 1.0kb upstream 6241 true Chr20: 39297759-39303999 Glycine max
Glyma.20G154100 1.0kb upstream 1.0kb upstream 1000 false Chr20: 39303000-39303999 Glycine max
Glyma.20G154100 1.0kb downstream 1.0kb downstream 6241 true Chr20: 39296759-39302999 Glycine max
Glyma.20G154100 1.0kb downstream 1.0kb downstream 1000 false Chr20: 39296759-39297758 Glycine max
Glyma.20G154100 2.0kb upstream 2.0kb upstream 7241 true Chr20: 39297759-39304999 Glycine max
Glyma.20G154100 2.0kb upstream 2.0kb upstream 2000 false Chr20: 39303000-39304999 Glycine max
Glyma.20G154100 2.0kb downstream 2.0kb downstream 7241 true Chr20: 39295759-39302999 Glycine max
Glyma.20G154100 2.0kb downstream 2.0kb downstream 2000 false Chr20: 39295759-39297758 Glycine max
Glyma.20G154100 5.0kb upstream 5.0kb upstream 10241 true Chr20: 39297759-39307999 Glycine max
Glyma.20G154100 5.0kb upstream 5.0kb upstream 5000 false Chr20: 39303000-39307999 Glycine max
Glyma.20G154100 5.0kb downstream 5.0kb downstream 10241 true Chr20: 39292759-39302999 Glycine max
Glyma.20G154100 5.0kb downstream 5.0kb downstream 5000 false Chr20: 39292759-39297758 Glycine max
Glyma.20G154100 10.0kb upstream 10.0kb upstream 15241 true Chr20: 39297759-39312999 Glycine max
Glyma.20G154100 10.0kb upstream 10.0kb upstream 10000 false Chr20: 39303000-39312999 Glycine max
Glyma.20G154100 10.0kb downstream 10.0kb downstream 15241 true Chr20: 39287759-39302999 Glycine max
Glyma.20G154100 10.0kb downstream 10.0kb downstream 10000 false Chr20: 39287759-39297758 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314975 5265 Fabidae View MSA
124062054 5270 Rosid View MSA
123749389 5271 Pentapetalae View MSA
122793525 5272 Eudicot View MSA
122045763 5273 Angiosperm View MSA
121310498 5274 Embryophyte View MSA
123347966 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.00778051 0.0 0.0395611 Low Low
cufflinks 5.65481 0.0 17.3755   High
cufflinks 0.22052 0.0 1.40282    
cufflinks 0.923807 0.0 4.5909    
cufflinks 0.396685 0.0 2.32156    
cufflinks 0.637465 0.0 3.45479    
cufflinks 0.261796 0.0 1.84116    
cufflinks 0.032561 0.0 0.132857 Low Low
cufflinks 0.147713 0.0 0.746454 Low  
cufflinks 0.01     Low  
cufflinks 0.071        
cufflinks 0.445       High
cufflinks 0.11        
cufflinks 0.222        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.023     Low  
cufflinks 0.021     Low  
cufflinks 0.286       High
cufflinks 2.259       High
cufflinks 0.007     Low  
cufflinks 0.01     Low  
cufflinks 0.001     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low Low
cufflinks 0.005     Low  
cufflinks 0.033     Low  

0 Strain