Gene : Glyma.20G155900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10773 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2 Genomic Order:  1559
Name:  ? Glyma.20G155900 Secondary Identifier:  ? PAC:30519992
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G155900 0.5kb upstream 0.5kb upstream 4128 true Chr20: 39477976-39482103 Glycine max
Glyma.20G155900 0.5kb upstream 0.5kb upstream 500 false Chr20: 39481604-39482103 Glycine max
Glyma.20G155900 0.5kb downstream 0.5kb downstream 4128 true Chr20: 39477476-39481603 Glycine max
Glyma.20G155900 0.5kb downstream 0.5kb downstream 500 false Chr20: 39477476-39477975 Glycine max
Glyma.20G155900 1.0kb upstream 1.0kb upstream 4628 true Chr20: 39477976-39482603 Glycine max
Glyma.20G155900 1.0kb upstream 1.0kb upstream 1000 false Chr20: 39481604-39482603 Glycine max
Glyma.20G155900 1.0kb downstream 1.0kb downstream 4628 true Chr20: 39476976-39481603 Glycine max
Glyma.20G155900 1.0kb downstream 1.0kb downstream 1000 false Chr20: 39476976-39477975 Glycine max
Glyma.20G155900 2.0kb upstream 2.0kb upstream 5628 true Chr20: 39477976-39483603 Glycine max
Glyma.20G155900 2.0kb upstream 2.0kb upstream 2000 false Chr20: 39481604-39483603 Glycine max
Glyma.20G155900 2.0kb downstream 2.0kb downstream 5628 true Chr20: 39475976-39481603 Glycine max
Glyma.20G155900 2.0kb downstream 2.0kb downstream 2000 false Chr20: 39475976-39477975 Glycine max
Glyma.20G155900 5.0kb upstream 5.0kb upstream 8628 true Chr20: 39477976-39486603 Glycine max
Glyma.20G155900 5.0kb upstream 5.0kb upstream 5000 false Chr20: 39481604-39486603 Glycine max
Glyma.20G155900 5.0kb downstream 5.0kb downstream 8628 true Chr20: 39472976-39481603 Glycine max
Glyma.20G155900 5.0kb downstream 5.0kb downstream 5000 false Chr20: 39472976-39477975 Glycine max
Glyma.20G155900 10.0kb upstream 10.0kb upstream 13628 true Chr20: 39477976-39491603 Glycine max
Glyma.20G155900 10.0kb upstream 10.0kb upstream 10000 false Chr20: 39481604-39491603 Glycine max
Glyma.20G155900 10.0kb downstream 10.0kb downstream 13628 true Chr20: 39467976-39481603 Glycine max
Glyma.20G155900 10.0kb downstream 10.0kb downstream 10000 false Chr20: 39467976-39477975 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312605 5265 Fabidae View MSA
124071266 5270 Rosid View MSA
123737177 5271 Pentapetalae View MSA
122793068 5272 Eudicot View MSA
122041807 5273 Angiosperm View MSA
121346108 5274 Embryophyte View MSA
123427545 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 91.7072 0.0 258.419 High  
cufflinks 74.8044 0.0 206.065 High Low
cufflinks 77.2864 0.0 214.107 High  
cufflinks 111.265 0.0 321.281 High  
cufflinks 95.2054 0.0 269.943 High  
cufflinks 93.5846 0.0 264.544 High  
cufflinks 170.718 0.0 525.391 High High
cufflinks 86.2755 0.0 241.283 High  
cufflinks 113.773 0.0 328.543 High  
cufflinks 12.046     High Low
cufflinks 23.881     High High
cufflinks 19.212     High  
cufflinks 13.492     High  
cufflinks 14.907     High  
cufflinks 16.205     High  
cufflinks 14.959     High  
cufflinks 15.815     High  
cufflinks 18.354     High  
cufflinks 15.561     High  
cufflinks 14.572     High  
cufflinks 20.964     High High
cufflinks 15.115     High  
cufflinks 11.851     High Low
cufflinks 24.088     High High
cufflinks 14.202     High  
cufflinks 21.554     High High

0 Strain