Gene : Glyma.20G181900 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR22950:SF240 - TRANSMEMBRANE AMINO ACID TRANSPORTER-RELATED Genomic Order:  1819
Name:  ? Glyma.20G181900 Secondary Identifier:  ? PAC:30520805
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G181900 0.5kb upstream 0.5kb upstream 8094 true Chr20: 41976535-41984628 Glycine max
Glyma.20G181900 0.5kb upstream 0.5kb upstream 500 false Chr20: 41984129-41984628 Glycine max
Glyma.20G181900 0.5kb downstream 0.5kb downstream 8094 true Chr20: 41976035-41984128 Glycine max
Glyma.20G181900 0.5kb downstream 0.5kb downstream 500 false Chr20: 41976035-41976534 Glycine max
Glyma.20G181900 1.0kb upstream 1.0kb upstream 8594 true Chr20: 41976535-41985128 Glycine max
Glyma.20G181900 1.0kb upstream 1.0kb upstream 1000 false Chr20: 41984129-41985128 Glycine max
Glyma.20G181900 1.0kb downstream 1.0kb downstream 8594 true Chr20: 41975535-41984128 Glycine max
Glyma.20G181900 1.0kb downstream 1.0kb downstream 1000 false Chr20: 41975535-41976534 Glycine max
Glyma.20G181900 2.0kb upstream 2.0kb upstream 9594 true Chr20: 41976535-41986128 Glycine max
Glyma.20G181900 2.0kb upstream 2.0kb upstream 2000 false Chr20: 41984129-41986128 Glycine max
Glyma.20G181900 2.0kb downstream 2.0kb downstream 9594 true Chr20: 41974535-41984128 Glycine max
Glyma.20G181900 2.0kb downstream 2.0kb downstream 2000 false Chr20: 41974535-41976534 Glycine max
Glyma.20G181900 5.0kb upstream 5.0kb upstream 12594 true Chr20: 41976535-41989128 Glycine max
Glyma.20G181900 5.0kb upstream 5.0kb upstream 5000 false Chr20: 41984129-41989128 Glycine max
Glyma.20G181900 5.0kb downstream 5.0kb downstream 12594 true Chr20: 41971535-41984128 Glycine max
Glyma.20G181900 5.0kb downstream 5.0kb downstream 5000 false Chr20: 41971535-41976534 Glycine max
Glyma.20G181900 10.0kb upstream 10.0kb upstream 17594 true Chr20: 41976535-41994128 Glycine max
Glyma.20G181900 10.0kb upstream 10.0kb upstream 10000 false Chr20: 41984129-41994128 Glycine max
Glyma.20G181900 10.0kb downstream 10.0kb downstream 17594 true Chr20: 41966535-41984128 Glycine max
Glyma.20G181900 10.0kb downstream 10.0kb downstream 10000 false Chr20: 41966535-41976534 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301224 5265 Fabidae View MSA
124062322 5270 Rosid View MSA
123752113 5271 Pentapetalae View MSA
122789589 5272 Eudicot View MSA
122050911 5273 Angiosperm View MSA
123429000 5275 Viridiplantae View MSA
121351519 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.8601 0.0 79.2442 High High
cufflinks 4.01838 0.0 14.4026   Low
cufflinks 18.8025 0.0 64.6698    
cufflinks 11.7064 0.0 40.1972    
cufflinks 22.5322 0.0 70.5151 High  
cufflinks 8.74485 0.0 30.8335    
cufflinks 9.71655 0.0 29.5141    
cufflinks 7.16273 0.0 25.9726    
cufflinks 22.6806 0.0 79.0102 High  
cufflinks 1.421        
cufflinks 7.657     High High
cufflinks 5.218        
cufflinks 4.297        
cufflinks 3.148        
cufflinks 0.941       Low
cufflinks 1.872        
cufflinks 1.652        
cufflinks 10.085     High High
cufflinks 1.029       Low
cufflinks 3.256        
cufflinks 5.252        
cufflinks 1.219        
cufflinks 0.526       Low
cufflinks 5.324        
cufflinks 2.107        
cufflinks 2.106        

0 Strain