Gene : Glyma.20G183500 G. max Wm82.a2.v1
Defline:  (1 of 2) PF12646 - Domain of unknown function (DUF3783) (DUF3783) Genomic Order:  1835
Name:  ? Glyma.20G183500 Secondary Identifier:  ? PAC:30519880
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G183500 0.5kb upstream 0.5kb upstream 3870 true Chr20: 42162467-42166336 Glycine max
Glyma.20G183500 0.5kb upstream 0.5kb upstream 500 false Chr20: 42165837-42166336 Glycine max
Glyma.20G183500 0.5kb downstream 0.5kb downstream 3870 true Chr20: 42161967-42165836 Glycine max
Glyma.20G183500 0.5kb downstream 0.5kb downstream 500 false Chr20: 42161967-42162466 Glycine max
Glyma.20G183500 1.0kb upstream 1.0kb upstream 4370 true Chr20: 42162467-42166836 Glycine max
Glyma.20G183500 1.0kb upstream 1.0kb upstream 1000 false Chr20: 42165837-42166836 Glycine max
Glyma.20G183500 1.0kb downstream 1.0kb downstream 4370 true Chr20: 42161467-42165836 Glycine max
Glyma.20G183500 1.0kb downstream 1.0kb downstream 1000 false Chr20: 42161467-42162466 Glycine max
Glyma.20G183500 2.0kb upstream 2.0kb upstream 5370 true Chr20: 42162467-42167836 Glycine max
Glyma.20G183500 2.0kb upstream 2.0kb upstream 2000 false Chr20: 42165837-42167836 Glycine max
Glyma.20G183500 2.0kb downstream 2.0kb downstream 5370 true Chr20: 42160467-42165836 Glycine max
Glyma.20G183500 2.0kb downstream 2.0kb downstream 2000 false Chr20: 42160467-42162466 Glycine max
Glyma.20G183500 5.0kb upstream 5.0kb upstream 8370 true Chr20: 42162467-42170836 Glycine max
Glyma.20G183500 5.0kb upstream 5.0kb upstream 5000 false Chr20: 42165837-42170836 Glycine max
Glyma.20G183500 5.0kb downstream 5.0kb downstream 8370 true Chr20: 42157467-42165836 Glycine max
Glyma.20G183500 5.0kb downstream 5.0kb downstream 5000 false Chr20: 42157467-42162466 Glycine max
Glyma.20G183500 10.0kb upstream 10.0kb upstream 13370 true Chr20: 42162467-42175836 Glycine max
Glyma.20G183500 10.0kb upstream 10.0kb upstream 10000 false Chr20: 42165837-42175836 Glycine max
Glyma.20G183500 10.0kb downstream 10.0kb downstream 13370 true Chr20: 42152467-42165836 Glycine max
Glyma.20G183500 10.0kb downstream 10.0kb downstream 10000 false Chr20: 42152467-42162466 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026510 5273 Angiosperm View MSA
122302083 5265 Fabidae View MSA
124068969 5270 Rosid View MSA
123739383 5271 Pentapetalae View MSA
122789644 5272 Eudicot View MSA
121351055 5274 Embryophyte View MSA
123425150 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.57679 0.0 14.2431    
cufflinks 3.12856 0.0 21.5704    
cufflinks 5.91271 0.0 36.041   High
cufflinks 3.46302 0.0 25.4025    
cufflinks 1.12663 0.0 9.82948    
cufflinks 0.423107 0.0 2.11265   Low
cufflinks 2.02709 0.0 13.5313    
cufflinks 2.47784 0.0 18.0058    
cufflinks 0.887496 0.0 6.81474    
cufflinks 0.09     Low  
cufflinks 0.011     Low Low
cufflinks 0.231       High
cufflinks 0.041     Low  
cufflinks 0.013     Low Low
cufflinks 0.028     Low  
cufflinks 0.212        
cufflinks 0.015     Low Low
cufflinks 0.18        
cufflinks 0.197        
cufflinks 0.202        
cufflinks 0.021     Low  
cufflinks 0.205        
cufflinks 0.185        
cufflinks 0.017     Low Low
cufflinks 0.206        
cufflinks 0.021     Low  

0 Strain