Gene : Glyma.20G186500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31003:SF4 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K13N2-RELATED Genomic Order:  1865
Name:  ? Glyma.20G186500 Secondary Identifier:  ? PAC:30519621
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G186500 0.5kb upstream 0.5kb upstream 3429 true Chr20: 42517948-42521376 Glycine max
Glyma.20G186500 0.5kb upstream 0.5kb upstream 500 false Chr20: 42517948-42518447 Glycine max
Glyma.20G186500 0.5kb downstream 0.5kb downstream 3429 true Chr20: 42518448-42521876 Glycine max
Glyma.20G186500 0.5kb downstream 0.5kb downstream 500 false Chr20: 42521377-42521876 Glycine max
Glyma.20G186500 1.0kb upstream 1.0kb upstream 3929 true Chr20: 42517448-42521376 Glycine max
Glyma.20G186500 1.0kb upstream 1.0kb upstream 1000 false Chr20: 42517448-42518447 Glycine max
Glyma.20G186500 1.0kb downstream 1.0kb downstream 3929 true Chr20: 42518448-42522376 Glycine max
Glyma.20G186500 1.0kb downstream 1.0kb downstream 1000 false Chr20: 42521377-42522376 Glycine max
Glyma.20G186500 2.0kb upstream 2.0kb upstream 4929 true Chr20: 42516448-42521376 Glycine max
Glyma.20G186500 2.0kb upstream 2.0kb upstream 2000 false Chr20: 42516448-42518447 Glycine max
Glyma.20G186500 2.0kb downstream 2.0kb downstream 4929 true Chr20: 42518448-42523376 Glycine max
Glyma.20G186500 2.0kb downstream 2.0kb downstream 2000 false Chr20: 42521377-42523376 Glycine max
Glyma.20G186500 5.0kb upstream 5.0kb upstream 7929 true Chr20: 42513448-42521376 Glycine max
Glyma.20G186500 5.0kb upstream 5.0kb upstream 5000 false Chr20: 42513448-42518447 Glycine max
Glyma.20G186500 5.0kb downstream 5.0kb downstream 7929 true Chr20: 42518448-42526376 Glycine max
Glyma.20G186500 5.0kb downstream 5.0kb downstream 5000 false Chr20: 42521377-42526376 Glycine max
Glyma.20G186500 10.0kb upstream 10.0kb upstream 12929 true Chr20: 42508448-42521376 Glycine max
Glyma.20G186500 10.0kb upstream 10.0kb upstream 10000 false Chr20: 42508448-42518447 Glycine max
Glyma.20G186500 10.0kb downstream 10.0kb downstream 12929 true Chr20: 42518448-42531376 Glycine max
Glyma.20G186500 10.0kb downstream 10.0kb downstream 10000 false Chr20: 42521377-42531376 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310107 5265 Fabidae View MSA
124062627 5270 Rosid View MSA
123739089 5271 Pentapetalae View MSA
122790332 5272 Eudicot View MSA
122043358 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350891 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.306228 0.0 1.14519   Low
cufflinks 0.459209 0.0 1.68082    
cufflinks 1.04678 0.0 3.59487    
cufflinks 2.13787 0.0 6.70638   High
cufflinks 1.11956 0.0 3.83194    
cufflinks 2.01369 0.0 6.38159   High
cufflinks 0.395153 0.0 1.4595   Low
cufflinks 0.60787 0.0 2.18394    
cufflinks 0.730648 0.0 2.59242    
cufflinks 0.557        
cufflinks 0.895        
cufflinks 2.461       High
cufflinks 0.814        
cufflinks 0.89        
cufflinks 0.348        
cufflinks 0.708        
cufflinks 0.125       Low
cufflinks 0.86        
cufflinks 0.337        
cufflinks 0.308        
cufflinks 0.195       Low
cufflinks 0.218       Low
cufflinks 0.414        
cufflinks 0.215       Low
cufflinks 0.357        
cufflinks 1.573       High

0 Strain