Gene : Glyma.20G178600 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11802:SF71 - SERINE CARBOXYPEPTIDASE-LIKE 26-RELATED Genomic Order:  1786
Name:  ? Glyma.20G178600 Secondary Identifier:  ? PAC:30522650
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G178600 0.5kb upstream 0.5kb upstream 6803 true Chr20: 41602747-41609549 Glycine max
Glyma.20G178600 0.5kb upstream 0.5kb upstream 500 false Chr20: 41602747-41603246 Glycine max
Glyma.20G178600 0.5kb downstream 0.5kb downstream 6803 true Chr20: 41603247-41610049 Glycine max
Glyma.20G178600 0.5kb downstream 0.5kb downstream 500 false Chr20: 41609550-41610049 Glycine max
Glyma.20G178600 1.0kb upstream 1.0kb upstream 7303 true Chr20: 41602247-41609549 Glycine max
Glyma.20G178600 1.0kb upstream 1.0kb upstream 1000 false Chr20: 41602247-41603246 Glycine max
Glyma.20G178600 1.0kb downstream 1.0kb downstream 7303 true Chr20: 41603247-41610549 Glycine max
Glyma.20G178600 1.0kb downstream 1.0kb downstream 1000 false Chr20: 41609550-41610549 Glycine max
Glyma.20G178600 2.0kb upstream 2.0kb upstream 8303 true Chr20: 41601247-41609549 Glycine max
Glyma.20G178600 2.0kb upstream 2.0kb upstream 2000 false Chr20: 41601247-41603246 Glycine max
Glyma.20G178600 2.0kb downstream 2.0kb downstream 8303 true Chr20: 41603247-41611549 Glycine max
Glyma.20G178600 2.0kb downstream 2.0kb downstream 2000 false Chr20: 41609550-41611549 Glycine max
Glyma.20G178600 5.0kb upstream 5.0kb upstream 11303 true Chr20: 41598247-41609549 Glycine max
Glyma.20G178600 5.0kb upstream 5.0kb upstream 5000 false Chr20: 41598247-41603246 Glycine max
Glyma.20G178600 5.0kb downstream 5.0kb downstream 11303 true Chr20: 41603247-41614549 Glycine max
Glyma.20G178600 5.0kb downstream 5.0kb downstream 5000 false Chr20: 41609550-41614549 Glycine max
Glyma.20G178600 10.0kb upstream 10.0kb upstream 16303 true Chr20: 41593247-41609549 Glycine max
Glyma.20G178600 10.0kb upstream 10.0kb upstream 10000 false Chr20: 41593247-41603246 Glycine max
Glyma.20G178600 10.0kb downstream 10.0kb downstream 16303 true Chr20: 41603247-41619549 Glycine max
Glyma.20G178600 10.0kb downstream 10.0kb downstream 10000 false Chr20: 41609550-41619549 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306736 5265 Fabidae View MSA
124064837 5270 Rosid View MSA
123739896 5271 Pentapetalae View MSA
122788632 5272 Eudicot View MSA
122046217 5273 Angiosperm View MSA
121349139 5274 Embryophyte View MSA
123428424 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.17048 0.0 6.98072    
cufflinks 3.33989 0.0 10.0873    
cufflinks 0.777622 0.0 2.77381   Low
cufflinks 7.38798 0.0 20.3523    
cufflinks 11.3985 0.0 30.6458   High
cufflinks 10.3026 0.0 27.788    
cufflinks 3.18584 0.0 9.72102    
cufflinks 9.87708 0.0 26.6965    
cufflinks 6.43584 0.0 17.9319    
cufflinks 11.609     High High
cufflinks 1.906        
cufflinks 1.02       Low
cufflinks 5.595       High
cufflinks 5.892       High
cufflinks 3.542        
cufflinks 1.274        
cufflinks 3.226        
cufflinks 3.884        
cufflinks 1.831        
cufflinks 0.974       Low
cufflinks 3.277        
cufflinks 1.333        
cufflinks 3.57        
cufflinks 1.422        
cufflinks 0.999       Low
cufflinks 4.551        

0 Strain