Gene : Glyma.20G179100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10566:SF44 - ATH SUBFAMILY PROTEIN ATH8 Genomic Order:  1791
Name:  ? Glyma.20G179100 Secondary Identifier:  ? PAC:30522150
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G179100 0.5kb upstream 0.5kb upstream 9450 true Chr20: 41633501-41642950 Glycine max
Glyma.20G179100 0.5kb upstream 0.5kb upstream 500 false Chr20: 41642451-41642950 Glycine max
Glyma.20G179100 0.5kb downstream 0.5kb downstream 9450 true Chr20: 41633001-41642450 Glycine max
Glyma.20G179100 0.5kb downstream 0.5kb downstream 500 false Chr20: 41633001-41633500 Glycine max
Glyma.20G179100 1.0kb upstream 1.0kb upstream 9950 true Chr20: 41633501-41643450 Glycine max
Glyma.20G179100 1.0kb upstream 1.0kb upstream 1000 false Chr20: 41642451-41643450 Glycine max
Glyma.20G179100 1.0kb downstream 1.0kb downstream 9950 true Chr20: 41632501-41642450 Glycine max
Glyma.20G179100 1.0kb downstream 1.0kb downstream 1000 false Chr20: 41632501-41633500 Glycine max
Glyma.20G179100 2.0kb upstream 2.0kb upstream 10950 true Chr20: 41633501-41644450 Glycine max
Glyma.20G179100 2.0kb upstream 2.0kb upstream 2000 false Chr20: 41642451-41644450 Glycine max
Glyma.20G179100 2.0kb downstream 2.0kb downstream 10950 true Chr20: 41631501-41642450 Glycine max
Glyma.20G179100 2.0kb downstream 2.0kb downstream 2000 false Chr20: 41631501-41633500 Glycine max
Glyma.20G179100 5.0kb upstream 5.0kb upstream 13950 true Chr20: 41633501-41647450 Glycine max
Glyma.20G179100 5.0kb upstream 5.0kb upstream 5000 false Chr20: 41642451-41647450 Glycine max
Glyma.20G179100 5.0kb downstream 5.0kb downstream 13950 true Chr20: 41628501-41642450 Glycine max
Glyma.20G179100 5.0kb downstream 5.0kb downstream 5000 false Chr20: 41628501-41633500 Glycine max
Glyma.20G179100 10.0kb upstream 10.0kb upstream 18950 true Chr20: 41633501-41652450 Glycine max
Glyma.20G179100 10.0kb upstream 10.0kb upstream 10000 false Chr20: 41642451-41652450 Glycine max
Glyma.20G179100 10.0kb downstream 10.0kb downstream 18950 true Chr20: 41623501-41642450 Glycine max
Glyma.20G179100 10.0kb downstream 10.0kb downstream 10000 false Chr20: 41623501-41633500 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309044 5265 Fabidae View MSA
124062948 5270 Rosid View MSA
123737936 5271 Pentapetalae View MSA
122792116 5272 Eudicot View MSA
122043068 5273 Angiosperm View MSA
121348599 5274 Embryophyte View MSA
123426801 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.8233 0.0 69.3077 High High
cufflinks 15.0993 0.0 40.6824    
cufflinks 10.3057 0.0 27.5016    
cufflinks 13.2445 0.0 35.5032    
cufflinks 5.62798 0.0 15.2592    
cufflinks 2.99456 0.0 8.56921   Low
cufflinks 12.7778 0.0 34.1974    
cufflinks 7.76866 0.0 20.7811    
cufflinks 5.54055 0.0 15.0216    
cufflinks 2.906        
cufflinks 0.396       Low
cufflinks 4.396        
cufflinks 1.024        
cufflinks 0.928        
cufflinks 0.892        
cufflinks 6.518        
cufflinks 0.716        
cufflinks 4.781        
cufflinks 6.341        
cufflinks 8.966     High High
cufflinks 0.62       Low
cufflinks 8.341     High High
cufflinks 6.773        
cufflinks 0.658       Low
cufflinks 8.328     High High
cufflinks 0.578       Low

0 Strain