Gene : Glyma.20G179400 G. max Wm82.a2.v1
Defline:  (1 of 2) 2.6.1.85 - Aminodeoxychorismate synthase / ADC synthase Genomic Order:  1794
Name:  ? Glyma.20G179400 Secondary Identifier:  ? PAC:30522551
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6543 Glycine max pathologic  
Gmax PWY-6612 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G179400 0.5kb upstream 0.5kb upstream 10703 true Chr20: 41679708-41690410 Glycine max
Glyma.20G179400 0.5kb upstream 0.5kb upstream 500 false Chr20: 41689911-41690410 Glycine max
Glyma.20G179400 0.5kb downstream 0.5kb downstream 10703 true Chr20: 41679208-41689910 Glycine max
Glyma.20G179400 0.5kb downstream 0.5kb downstream 500 false Chr20: 41679208-41679707 Glycine max
Glyma.20G179400 1.0kb upstream 1.0kb upstream 11203 true Chr20: 41679708-41690910 Glycine max
Glyma.20G179400 1.0kb upstream 1.0kb upstream 1000 false Chr20: 41689911-41690910 Glycine max
Glyma.20G179400 1.0kb downstream 1.0kb downstream 11203 true Chr20: 41678708-41689910 Glycine max
Glyma.20G179400 1.0kb downstream 1.0kb downstream 1000 false Chr20: 41678708-41679707 Glycine max
Glyma.20G179400 2.0kb upstream 2.0kb upstream 12203 true Chr20: 41679708-41691910 Glycine max
Glyma.20G179400 2.0kb upstream 2.0kb upstream 2000 false Chr20: 41689911-41691910 Glycine max
Glyma.20G179400 2.0kb downstream 2.0kb downstream 12203 true Chr20: 41677708-41689910 Glycine max
Glyma.20G179400 2.0kb downstream 2.0kb downstream 2000 false Chr20: 41677708-41679707 Glycine max
Glyma.20G179400 5.0kb upstream 5.0kb upstream 15203 true Chr20: 41679708-41694910 Glycine max
Glyma.20G179400 5.0kb upstream 5.0kb upstream 5000 false Chr20: 41689911-41694910 Glycine max
Glyma.20G179400 5.0kb downstream 5.0kb downstream 15203 true Chr20: 41674708-41689910 Glycine max
Glyma.20G179400 5.0kb downstream 5.0kb downstream 5000 false Chr20: 41674708-41679707 Glycine max
Glyma.20G179400 10.0kb upstream 10.0kb upstream 20203 true Chr20: 41679708-41699910 Glycine max
Glyma.20G179400 10.0kb upstream 10.0kb upstream 10000 false Chr20: 41689911-41699910 Glycine max
Glyma.20G179400 10.0kb downstream 10.0kb downstream 20203 true Chr20: 41669708-41689910 Glycine max
Glyma.20G179400 10.0kb downstream 10.0kb downstream 10000 false Chr20: 41669708-41679707 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302827 5265 Fabidae View MSA
124072524 5270 Rosid View MSA
123738750 5271 Pentapetalae View MSA
122789996 5272 Eudicot View MSA
122041819 5273 Angiosperm View MSA
121349343 5274 Embryophyte View MSA
123425375 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.75414 0.0 10.5574    
cufflinks 2.1587 0.0 8.06898    
cufflinks 2.48334 0.0 8.80321    
cufflinks 1.8979 0.0 8.719    
cufflinks 0.748588 0.0 4.63711    
cufflinks 0.212334 0.0 1.04388 Low Low
cufflinks 1.92641 0.0 11.5233    
cufflinks 2.36898 0.0 10.0987    
cufflinks 1.76752 0.0 8.41707    
cufflinks 0.205       High
cufflinks 0.011     Low Low
cufflinks 0.164        
cufflinks 0.028     Low  
cufflinks 0.045     Low  
cufflinks 0.07        
cufflinks 0.105        
cufflinks 0.035     Low  
cufflinks 0.208       High
cufflinks 0.152        
cufflinks 0.071     Low  
cufflinks 0.006     Low Low
cufflinks 0.087     Low  
cufflinks 0.122        
cufflinks 0.014     Low Low
cufflinks 0.096     Low  
cufflinks 0.012     Low Low

0 Strain