Gene : Glyma.20G181000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10694:SF45 - LYSINE-SPECIFIC DEMETHYLASE ELF6-RELATED Genomic Order:  1810
Name:  ? Glyma.20G181000 Secondary Identifier:  ? PAC:30523230
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G181000 0.5kb upstream 0.5kb upstream 9420 true Chr20: 41910664-41920083 Glycine max
Glyma.20G181000 0.5kb upstream 0.5kb upstream 500 false Chr20: 41910664-41911163 Glycine max
Glyma.20G181000 0.5kb downstream 0.5kb downstream 9420 true Chr20: 41911164-41920583 Glycine max
Glyma.20G181000 0.5kb downstream 0.5kb downstream 500 false Chr20: 41920084-41920583 Glycine max
Glyma.20G181000 1.0kb upstream 1.0kb upstream 9920 true Chr20: 41910164-41920083 Glycine max
Glyma.20G181000 1.0kb upstream 1.0kb upstream 1000 false Chr20: 41910164-41911163 Glycine max
Glyma.20G181000 1.0kb downstream 1.0kb downstream 9920 true Chr20: 41911164-41921083 Glycine max
Glyma.20G181000 1.0kb downstream 1.0kb downstream 1000 false Chr20: 41920084-41921083 Glycine max
Glyma.20G181000 2.0kb upstream 2.0kb upstream 10920 true Chr20: 41909164-41920083 Glycine max
Glyma.20G181000 2.0kb upstream 2.0kb upstream 2000 false Chr20: 41909164-41911163 Glycine max
Glyma.20G181000 2.0kb downstream 2.0kb downstream 10920 true Chr20: 41911164-41922083 Glycine max
Glyma.20G181000 2.0kb downstream 2.0kb downstream 2000 false Chr20: 41920084-41922083 Glycine max
Glyma.20G181000 5.0kb upstream 5.0kb upstream 13920 true Chr20: 41906164-41920083 Glycine max
Glyma.20G181000 5.0kb upstream 5.0kb upstream 5000 false Chr20: 41906164-41911163 Glycine max
Glyma.20G181000 5.0kb downstream 5.0kb downstream 13920 true Chr20: 41911164-41925083 Glycine max
Glyma.20G181000 5.0kb downstream 5.0kb downstream 5000 false Chr20: 41920084-41925083 Glycine max
Glyma.20G181000 10.0kb upstream 10.0kb upstream 18920 true Chr20: 41901164-41920083 Glycine max
Glyma.20G181000 10.0kb upstream 10.0kb upstream 10000 false Chr20: 41901164-41911163 Glycine max
Glyma.20G181000 10.0kb downstream 10.0kb downstream 18920 true Chr20: 41911164-41930083 Glycine max
Glyma.20G181000 10.0kb downstream 10.0kb downstream 10000 false Chr20: 41920084-41930083 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307480 5265 Fabidae View MSA
124063853 5270 Rosid View MSA
123752621 5271 Pentapetalae View MSA
122794300 5272 Eudicot View MSA
122042363 5273 Angiosperm View MSA
123428928 5275 Viridiplantae View MSA
121351254 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.39823 0.0 11.8016   High
cufflinks 4.27587 0.0 11.48   High
cufflinks 2.77455 0.0 7.61311    
cufflinks 2.62871 0.0 7.25767    
cufflinks 2.29764 0.0 6.44343    
cufflinks 2.00732 0.0 5.7005   Low
cufflinks 4.04794 0.0 10.907   High
cufflinks 2.02412 0.0 5.73441   Low
cufflinks 2.76592 0.0 7.61553    
cufflinks 1.549        
cufflinks 1.516        
cufflinks 2.601        
cufflinks 1.996        
cufflinks 2.185        
cufflinks 1.769        
cufflinks 4.413       High
cufflinks 0.938       Low
cufflinks 3.277        
cufflinks 3.705        
cufflinks 5.331       High
cufflinks 1.364       Low
cufflinks 5.19       High
cufflinks 4.091        
cufflinks 1.46        
cufflinks 4.858       High
cufflinks 1.288       Low

0 Strain