Gene : Glyma.20G175100 G. max Wm82.a2.v1
Defline:  (1 of 10) PTHR24349:SF166 - CALCIUM-DEPENDENT PROTEIN KINASE 11-RELATED Genomic Order:  1751
Name:  ? Glyma.20G175100 Secondary Identifier:  ? PAC:30521890
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G175100 0.5kb upstream 0.5kb upstream 5731 true Chr20: 41257923-41263653 Glycine max
Glyma.20G175100 0.5kb upstream 0.5kb upstream 500 false Chr20: 41257923-41258422 Glycine max
Glyma.20G175100 0.5kb downstream 0.5kb downstream 5731 true Chr20: 41258423-41264153 Glycine max
Glyma.20G175100 0.5kb downstream 0.5kb downstream 500 false Chr20: 41263654-41264153 Glycine max
Glyma.20G175100 1.0kb upstream 1.0kb upstream 6231 true Chr20: 41257423-41263653 Glycine max
Glyma.20G175100 1.0kb upstream 1.0kb upstream 1000 false Chr20: 41257423-41258422 Glycine max
Glyma.20G175100 1.0kb downstream 1.0kb downstream 6231 true Chr20: 41258423-41264653 Glycine max
Glyma.20G175100 1.0kb downstream 1.0kb downstream 1000 false Chr20: 41263654-41264653 Glycine max
Glyma.20G175100 2.0kb upstream 2.0kb upstream 7231 true Chr20: 41256423-41263653 Glycine max
Glyma.20G175100 2.0kb upstream 2.0kb upstream 2000 false Chr20: 41256423-41258422 Glycine max
Glyma.20G175100 2.0kb downstream 2.0kb downstream 7231 true Chr20: 41258423-41265653 Glycine max
Glyma.20G175100 2.0kb downstream 2.0kb downstream 2000 false Chr20: 41263654-41265653 Glycine max
Glyma.20G175100 5.0kb upstream 5.0kb upstream 10231 true Chr20: 41253423-41263653 Glycine max
Glyma.20G175100 5.0kb upstream 5.0kb upstream 5000 false Chr20: 41253423-41258422 Glycine max
Glyma.20G175100 5.0kb downstream 5.0kb downstream 10231 true Chr20: 41258423-41268653 Glycine max
Glyma.20G175100 5.0kb downstream 5.0kb downstream 5000 false Chr20: 41263654-41268653 Glycine max
Glyma.20G175100 10.0kb upstream 10.0kb upstream 15231 true Chr20: 41248423-41263653 Glycine max
Glyma.20G175100 10.0kb upstream 10.0kb upstream 10000 false Chr20: 41248423-41258422 Glycine max
Glyma.20G175100 10.0kb downstream 10.0kb downstream 15231 true Chr20: 41258423-41273653 Glycine max
Glyma.20G175100 10.0kb downstream 10.0kb downstream 10000 false Chr20: 41263654-41273653 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300300 5265 Fabidae View MSA
124069708 5270 Rosid View MSA
123741053 5271 Pentapetalae View MSA
122787584 5272 Eudicot View MSA
122047311 5273 Angiosperm View MSA
121310726 5274 Embryophyte View MSA
123427978 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.244397 0.0 0.927651   Low
cufflinks 3.78909 0.0 11.1956    
cufflinks 3.58349 0.0 10.6108    
cufflinks 1.56282 0.0 5.20573    
cufflinks 2.67265 0.0 8.26598    
cufflinks 3.5713 0.0 10.6013    
cufflinks 2.90508 0.0 8.8857    
cufflinks 5.49925 0.0 15.5051    
cufflinks 1.39524 0.0 4.72018    
cufflinks 1.96        
cufflinks 9.493     High High
cufflinks 0.77        
cufflinks 1.672        
cufflinks 1.645        
cufflinks 1.927        
cufflinks 0.986        
cufflinks 1.336        
cufflinks 1.186        
cufflinks 1.978        
cufflinks 0.69       Low
cufflinks 4.245       High
cufflinks 0.697       Low
cufflinks 0.404       Low
cufflinks 6.356     High High
cufflinks 0.938        
cufflinks 3.023        

0 Strain