Gene : Glyma.20G171300 G. max Wm82.a2.v1
Defline:  (1 of 2) PF07343 - Protein of unknown function (DUF1475) (DUF1475) Genomic Order:  1713
Name:  ? Glyma.20G171300 Secondary Identifier:  ? PAC:30523280
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G171300 0.5kb upstream 0.5kb upstream 7326 true Chr20: 40904818-40912143 Glycine max
Glyma.20G171300 0.5kb upstream 0.5kb upstream 500 false Chr20: 40911644-40912143 Glycine max
Glyma.20G171300 0.5kb downstream 0.5kb downstream 7326 true Chr20: 40904318-40911643 Glycine max
Glyma.20G171300 0.5kb downstream 0.5kb downstream 500 false Chr20: 40904318-40904817 Glycine max
Glyma.20G171300 1.0kb upstream 1.0kb upstream 7826 true Chr20: 40904818-40912643 Glycine max
Glyma.20G171300 1.0kb upstream 1.0kb upstream 1000 false Chr20: 40911644-40912643 Glycine max
Glyma.20G171300 1.0kb downstream 1.0kb downstream 7826 true Chr20: 40903818-40911643 Glycine max
Glyma.20G171300 1.0kb downstream 1.0kb downstream 1000 false Chr20: 40903818-40904817 Glycine max
Glyma.20G171300 2.0kb upstream 2.0kb upstream 8826 true Chr20: 40904818-40913643 Glycine max
Glyma.20G171300 2.0kb upstream 2.0kb upstream 2000 false Chr20: 40911644-40913643 Glycine max
Glyma.20G171300 2.0kb downstream 2.0kb downstream 8826 true Chr20: 40902818-40911643 Glycine max
Glyma.20G171300 2.0kb downstream 2.0kb downstream 2000 false Chr20: 40902818-40904817 Glycine max
Glyma.20G171300 5.0kb upstream 5.0kb upstream 11826 true Chr20: 40904818-40916643 Glycine max
Glyma.20G171300 5.0kb upstream 5.0kb upstream 5000 false Chr20: 40911644-40916643 Glycine max
Glyma.20G171300 5.0kb downstream 5.0kb downstream 11826 true Chr20: 40899818-40911643 Glycine max
Glyma.20G171300 5.0kb downstream 5.0kb downstream 5000 false Chr20: 40899818-40904817 Glycine max
Glyma.20G171300 10.0kb upstream 10.0kb upstream 16826 true Chr20: 40904818-40921643 Glycine max
Glyma.20G171300 10.0kb upstream 10.0kb upstream 10000 false Chr20: 40911644-40921643 Glycine max
Glyma.20G171300 10.0kb downstream 10.0kb downstream 16826 true Chr20: 40894818-40911643 Glycine max
Glyma.20G171300 10.0kb downstream 10.0kb downstream 10000 false Chr20: 40894818-40904817 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026258 5273 Angiosperm View MSA
122307319 5265 Fabidae View MSA
124062970 5270 Rosid View MSA
123738369 5271 Pentapetalae View MSA
122787802 5272 Eudicot View MSA
121296248 5274 Embryophyte View MSA
123334445 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.5458 0.0 73.4985 High High
cufflinks 13.4108 0.0 36.7954    
cufflinks 20.4379 0.0 54.7587 High High
cufflinks 7.59357 0.0 22.0917    
cufflinks 3.57482 0.0 11.5968   Low
cufflinks 6.9251 0.0 20.4234    
cufflinks 4.71746 0.0 14.7382    
cufflinks 8.23893 0.0 23.712    
cufflinks 3.58854 0.0 11.5886   Low
cufflinks 1.439        
cufflinks 0.398       Low
cufflinks 2.231        
cufflinks 0.533        
cufflinks 0.289       Low
cufflinks 0.395       Low
cufflinks 4.335       High
cufflinks 0.446       Low
cufflinks 1.6        
cufflinks 2.125        
cufflinks 4.556       High
cufflinks 0.615        
cufflinks 4.3       High
cufflinks 3.734       High
cufflinks 0.886        
cufflinks 4.815       High
cufflinks 0.71        

0 Strain