Gene : Glyma.20G207000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13773//PTHR13773:SF13 - PHOSPHATIDATE CYTIDYLYLTRANSFERASE Genomic Order:  2070
Name:  ? Glyma.20G207000 Secondary Identifier:  ? PAC:30519898
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY0-1319 Glycine max pathologic  
Gmax PWY4FS-7 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G207000 0.5kb upstream 0.5kb upstream 7504 true Chr20: 44393606-44401109 Glycine max
Glyma.20G207000 0.5kb upstream 0.5kb upstream 500 false Chr20: 44393606-44394105 Glycine max
Glyma.20G207000 0.5kb downstream 0.5kb downstream 7504 true Chr20: 44394106-44401609 Glycine max
Glyma.20G207000 0.5kb downstream 0.5kb downstream 500 false Chr20: 44401110-44401609 Glycine max
Glyma.20G207000 1.0kb upstream 1.0kb upstream 8004 true Chr20: 44393106-44401109 Glycine max
Glyma.20G207000 1.0kb upstream 1.0kb upstream 1000 false Chr20: 44393106-44394105 Glycine max
Glyma.20G207000 1.0kb downstream 1.0kb downstream 8004 true Chr20: 44394106-44402109 Glycine max
Glyma.20G207000 1.0kb downstream 1.0kb downstream 1000 false Chr20: 44401110-44402109 Glycine max
Glyma.20G207000 2.0kb upstream 2.0kb upstream 9004 true Chr20: 44392106-44401109 Glycine max
Glyma.20G207000 2.0kb upstream 2.0kb upstream 2000 false Chr20: 44392106-44394105 Glycine max
Glyma.20G207000 2.0kb downstream 2.0kb downstream 9004 true Chr20: 44394106-44403109 Glycine max
Glyma.20G207000 2.0kb downstream 2.0kb downstream 2000 false Chr20: 44401110-44403109 Glycine max
Glyma.20G207000 5.0kb upstream 5.0kb upstream 12004 true Chr20: 44389106-44401109 Glycine max
Glyma.20G207000 5.0kb upstream 5.0kb upstream 5000 false Chr20: 44389106-44394105 Glycine max
Glyma.20G207000 5.0kb downstream 5.0kb downstream 12004 true Chr20: 44394106-44406109 Glycine max
Glyma.20G207000 5.0kb downstream 5.0kb downstream 5000 false Chr20: 44401110-44406109 Glycine max
Glyma.20G207000 10.0kb upstream 10.0kb upstream 17004 true Chr20: 44384106-44401109 Glycine max
Glyma.20G207000 10.0kb upstream 10.0kb upstream 10000 false Chr20: 44384106-44394105 Glycine max
Glyma.20G207000 10.0kb downstream 10.0kb downstream 17004 true Chr20: 44394106-44411109 Glycine max
Glyma.20G207000 10.0kb downstream 10.0kb downstream 10000 false Chr20: 44401110-44411109 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302445 5265 Fabidae View MSA
124063669 5270 Rosid View MSA
123751234 5271 Pentapetalae View MSA
122787509 5272 Eudicot View MSA
122045670 5273 Angiosperm View MSA
121346295 5274 Embryophyte View MSA
123428107 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.1983 0.0 73.1456 High High
cufflinks 22.476 0.0 60.097 High  
cufflinks 23.0801 0.0 61.809 High  
cufflinks 20.7963 0.0 55.5339 High  
cufflinks 15.6477 0.0 41.8074   Low
cufflinks 18.1904 0.0 48.5296    
cufflinks 14.862 0.0 39.746   Low
cufflinks 20.8655 0.0 55.7171    
cufflinks 15.7728 0.0 42.1219   Low
cufflinks 5.884        
cufflinks 1.115       Low
cufflinks 4.815        
cufflinks 5.484        
cufflinks 5.237        
cufflinks 1.935       Low
cufflinks 7.849     High  
cufflinks 3.09        
cufflinks 5.131        
cufflinks 6.426        
cufflinks 7.981     High  
cufflinks 1.711       Low
cufflinks 8.469     High High
cufflinks 8.258     High  
cufflinks 1.35       Low
cufflinks 8.317     High  
cufflinks 2.65        

0 Strain