Gene : Glyma.20G207100 G. max Wm82.a2.v1
Defline:  (1 of 23) PF04755 - PAP_fibrillin (PAP_fibrillin) Genomic Order:  2071
Name:  ? Glyma.20G207100 Secondary Identifier:  ? PAC:30522250
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G207100 0.5kb upstream 0.5kb upstream 2071 true Chr20: 44406342-44408412 Glycine max
Glyma.20G207100 0.5kb upstream 0.5kb upstream 500 false Chr20: 44406342-44406841 Glycine max
Glyma.20G207100 0.5kb downstream 0.5kb downstream 2071 true Chr20: 44406842-44408912 Glycine max
Glyma.20G207100 0.5kb downstream 0.5kb downstream 500 false Chr20: 44408413-44408912 Glycine max
Glyma.20G207100 1.0kb upstream 1.0kb upstream 2571 true Chr20: 44405842-44408412 Glycine max
Glyma.20G207100 1.0kb upstream 1.0kb upstream 1000 false Chr20: 44405842-44406841 Glycine max
Glyma.20G207100 1.0kb downstream 1.0kb downstream 2571 true Chr20: 44406842-44409412 Glycine max
Glyma.20G207100 1.0kb downstream 1.0kb downstream 1000 false Chr20: 44408413-44409412 Glycine max
Glyma.20G207100 2.0kb upstream 2.0kb upstream 3571 true Chr20: 44404842-44408412 Glycine max
Glyma.20G207100 2.0kb upstream 2.0kb upstream 2000 false Chr20: 44404842-44406841 Glycine max
Glyma.20G207100 2.0kb downstream 2.0kb downstream 3571 true Chr20: 44406842-44410412 Glycine max
Glyma.20G207100 2.0kb downstream 2.0kb downstream 2000 false Chr20: 44408413-44410412 Glycine max
Glyma.20G207100 5.0kb upstream 5.0kb upstream 6571 true Chr20: 44401842-44408412 Glycine max
Glyma.20G207100 5.0kb upstream 5.0kb upstream 5000 false Chr20: 44401842-44406841 Glycine max
Glyma.20G207100 5.0kb downstream 5.0kb downstream 6571 true Chr20: 44406842-44413412 Glycine max
Glyma.20G207100 5.0kb downstream 5.0kb downstream 5000 false Chr20: 44408413-44413412 Glycine max
Glyma.20G207100 10.0kb upstream 10.0kb upstream 11571 true Chr20: 44396842-44408412 Glycine max
Glyma.20G207100 10.0kb upstream 10.0kb upstream 10000 false Chr20: 44396842-44406841 Glycine max
Glyma.20G207100 10.0kb downstream 10.0kb downstream 11571 true Chr20: 44406842-44418412 Glycine max
Glyma.20G207100 10.0kb downstream 10.0kb downstream 10000 false Chr20: 44408413-44418412 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301966 5265 Fabidae View MSA
124068895 5270 Rosid View MSA
123753457 5271 Pentapetalae View MSA
122789473 5272 Eudicot View MSA
122042297 5273 Angiosperm View MSA
121345801 5274 Embryophyte View MSA
123427802 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 102.118 0.0 298.418 High High
cufflinks 31.6373 0.0 84.4778 High  
cufflinks 17.2375 0.0 46.5242    
cufflinks 33.3854 0.0 89.2351 High  
cufflinks 11.6009 0.0 32.185    
cufflinks 11.9575 0.0 33.0887    
cufflinks 14.7945 0.0 40.2863    
cufflinks 30.9066 0.0 82.5272 High  
cufflinks 11.5189 0.0 31.9219    
cufflinks 15.708     High  
cufflinks 1.497       Low
cufflinks 17.594     High  
cufflinks 4.403        
cufflinks 3.282        
cufflinks 3.209        
cufflinks 33.861     High High
cufflinks 2.565       Low
cufflinks 23.78     High  
cufflinks 19.585     High  
cufflinks 27.259     High  
cufflinks 2.063       Low
cufflinks 33.47     High High
cufflinks 43.428     High High
cufflinks 2.42       Low
cufflinks 36.215     High High
cufflinks 2.62        

0 Strain