Gene : Glyma.20G198600 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR12459:SF7 - GB Genomic Order:  1986
Name:  ? Glyma.20G198600 Secondary Identifier:  ? PAC:30521441
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G198600 0.5kb upstream 0.5kb upstream 5683 true Chr20: 43634710-43640392 Glycine max
Glyma.20G198600 0.5kb upstream 0.5kb upstream 500 false Chr20: 43639893-43640392 Glycine max
Glyma.20G198600 0.5kb downstream 0.5kb downstream 5683 true Chr20: 43634210-43639892 Glycine max
Glyma.20G198600 0.5kb downstream 0.5kb downstream 500 false Chr20: 43634210-43634709 Glycine max
Glyma.20G198600 1.0kb upstream 1.0kb upstream 6183 true Chr20: 43634710-43640892 Glycine max
Glyma.20G198600 1.0kb upstream 1.0kb upstream 1000 false Chr20: 43639893-43640892 Glycine max
Glyma.20G198600 1.0kb downstream 1.0kb downstream 6183 true Chr20: 43633710-43639892 Glycine max
Glyma.20G198600 1.0kb downstream 1.0kb downstream 1000 false Chr20: 43633710-43634709 Glycine max
Glyma.20G198600 2.0kb upstream 2.0kb upstream 7183 true Chr20: 43634710-43641892 Glycine max
Glyma.20G198600 2.0kb upstream 2.0kb upstream 2000 false Chr20: 43639893-43641892 Glycine max
Glyma.20G198600 2.0kb downstream 2.0kb downstream 7183 true Chr20: 43632710-43639892 Glycine max
Glyma.20G198600 2.0kb downstream 2.0kb downstream 2000 false Chr20: 43632710-43634709 Glycine max
Glyma.20G198600 5.0kb upstream 5.0kb upstream 10183 true Chr20: 43634710-43644892 Glycine max
Glyma.20G198600 5.0kb upstream 5.0kb upstream 5000 false Chr20: 43639893-43644892 Glycine max
Glyma.20G198600 5.0kb downstream 5.0kb downstream 10183 true Chr20: 43629710-43639892 Glycine max
Glyma.20G198600 5.0kb downstream 5.0kb downstream 5000 false Chr20: 43629710-43634709 Glycine max
Glyma.20G198600 10.0kb upstream 10.0kb upstream 15183 true Chr20: 43634710-43649892 Glycine max
Glyma.20G198600 10.0kb upstream 10.0kb upstream 10000 false Chr20: 43639893-43649892 Glycine max
Glyma.20G198600 10.0kb downstream 10.0kb downstream 15183 true Chr20: 43624710-43639892 Glycine max
Glyma.20G198600 10.0kb downstream 10.0kb downstream 10000 false Chr20: 43624710-43634709 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306844 5265 Fabidae View MSA
124066505 5270 Rosid View MSA
123738998 5271 Pentapetalae View MSA
122785613 5272 Eudicot View MSA
122047652 5273 Angiosperm View MSA
121343908 5274 Embryophyte View MSA
123425217 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.45272 0.0 34.3126    
cufflinks 5.61971 0.0 25.4268   Low
cufflinks 10.1974 0.0 40.8925   High
cufflinks 7.30022 0.0 31.2248    
cufflinks 7.9407 0.0 36.0596    
cufflinks 7.44535 0.0 34.4197    
cufflinks 6.77101 0.0 29.362    
cufflinks 7.95852 0.0 33.0075    
cufflinks 6.87193 0.0 32.7079    
cufflinks 0.543        
cufflinks 1.171       High
cufflinks 0.55        
cufflinks 0.532        
cufflinks 0.52        
cufflinks 0.894        
cufflinks 0.636        
cufflinks 0.446       Low
cufflinks 0.518        
cufflinks 0.587        
cufflinks 0.722        
cufflinks 1.038       High
cufflinks 0.674        
cufflinks 0.447       Low
cufflinks 1.138       High
cufflinks 0.651        
cufflinks 0.784        

0 Strain