Gene : Glyma.20G199400 G. max Wm82.a2.v1
Defline:  (1 of 90) PF03330 - Rare lipoprotein A (RlpA)-like double-psi beta-barrel Genomic Order:  1994
Name:  ? Glyma.20G199400 Secondary Identifier:  ? PAC:30522001
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G199400 0.5kb upstream 0.5kb upstream 941 true Chr20: 43706452-43707392 Glycine max
Glyma.20G199400 0.5kb upstream 0.5kb upstream 500 false Chr20: 43706893-43707392 Glycine max
Glyma.20G199400 0.5kb downstream 0.5kb downstream 941 true Chr20: 43705952-43706892 Glycine max
Glyma.20G199400 0.5kb downstream 0.5kb downstream 500 false Chr20: 43705952-43706451 Glycine max
Glyma.20G199400 1.0kb upstream 1.0kb upstream 1441 true Chr20: 43706452-43707892 Glycine max
Glyma.20G199400 1.0kb upstream 1.0kb upstream 1000 false Chr20: 43706893-43707892 Glycine max
Glyma.20G199400 1.0kb downstream 1.0kb downstream 1441 true Chr20: 43705452-43706892 Glycine max
Glyma.20G199400 1.0kb downstream 1.0kb downstream 1000 false Chr20: 43705452-43706451 Glycine max
Glyma.20G199400 2.0kb upstream 2.0kb upstream 2441 true Chr20: 43706452-43708892 Glycine max
Glyma.20G199400 2.0kb upstream 2.0kb upstream 2000 false Chr20: 43706893-43708892 Glycine max
Glyma.20G199400 2.0kb downstream 2.0kb downstream 2441 true Chr20: 43704452-43706892 Glycine max
Glyma.20G199400 2.0kb downstream 2.0kb downstream 2000 false Chr20: 43704452-43706451 Glycine max
Glyma.20G199400 5.0kb upstream 5.0kb upstream 5441 true Chr20: 43706452-43711892 Glycine max
Glyma.20G199400 5.0kb upstream 5.0kb upstream 5000 false Chr20: 43706893-43711892 Glycine max
Glyma.20G199400 5.0kb downstream 5.0kb downstream 5441 true Chr20: 43701452-43706892 Glycine max
Glyma.20G199400 5.0kb downstream 5.0kb downstream 5000 false Chr20: 43701452-43706451 Glycine max
Glyma.20G199400 10.0kb upstream 10.0kb upstream 10441 true Chr20: 43706452-43716892 Glycine max
Glyma.20G199400 10.0kb upstream 10.0kb upstream 10000 false Chr20: 43706893-43716892 Glycine max
Glyma.20G199400 10.0kb downstream 10.0kb downstream 10441 true Chr20: 43696452-43706892 Glycine max
Glyma.20G199400 10.0kb downstream 10.0kb downstream 10000 false Chr20: 43696452-43706451 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254635 5265 Fabidae View MSA
124041594 5270 Rosid View MSA
123612353 5271 Pentapetalae View MSA
122646859 5272 Eudicot View MSA
122049073 5273 Angiosperm View MSA
121348400 5274 Embryophyte View MSA
123380848 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain