Gene : Glyma.20G201400 G. max Wm82.a2.v1
Defline:  (1 of 2) 2.1.1.79 - Cyclopropane-fatty-acyl-phospholipid synthase / Unsaturated-phospholipid methyltransferase Genomic Order:  2014
Name:  ? Glyma.20G201400 Secondary Identifier:  ? PAC:30522350
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-4942 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G201400 0.5kb upstream 0.5kb upstream 9849 true Chr20: 43832284-43842132 Glycine max
Glyma.20G201400 0.5kb upstream 0.5kb upstream 500 false Chr20: 43841633-43842132 Glycine max
Glyma.20G201400 0.5kb downstream 0.5kb downstream 9849 true Chr20: 43831784-43841632 Glycine max
Glyma.20G201400 0.5kb downstream 0.5kb downstream 500 false Chr20: 43831784-43832283 Glycine max
Glyma.20G201400 1.0kb upstream 1.0kb upstream 10349 true Chr20: 43832284-43842632 Glycine max
Glyma.20G201400 1.0kb upstream 1.0kb upstream 1000 false Chr20: 43841633-43842632 Glycine max
Glyma.20G201400 1.0kb downstream 1.0kb downstream 10349 true Chr20: 43831284-43841632 Glycine max
Glyma.20G201400 1.0kb downstream 1.0kb downstream 1000 false Chr20: 43831284-43832283 Glycine max
Glyma.20G201400 2.0kb upstream 2.0kb upstream 11349 true Chr20: 43832284-43843632 Glycine max
Glyma.20G201400 2.0kb upstream 2.0kb upstream 2000 false Chr20: 43841633-43843632 Glycine max
Glyma.20G201400 2.0kb downstream 2.0kb downstream 11349 true Chr20: 43830284-43841632 Glycine max
Glyma.20G201400 2.0kb downstream 2.0kb downstream 2000 false Chr20: 43830284-43832283 Glycine max
Glyma.20G201400 5.0kb upstream 5.0kb upstream 14349 true Chr20: 43832284-43846632 Glycine max
Glyma.20G201400 5.0kb upstream 5.0kb upstream 5000 false Chr20: 43841633-43846632 Glycine max
Glyma.20G201400 5.0kb downstream 5.0kb downstream 14349 true Chr20: 43827284-43841632 Glycine max
Glyma.20G201400 5.0kb downstream 5.0kb downstream 5000 false Chr20: 43827284-43832283 Glycine max
Glyma.20G201400 10.0kb upstream 10.0kb upstream 19349 true Chr20: 43832284-43851632 Glycine max
Glyma.20G201400 10.0kb upstream 10.0kb upstream 10000 false Chr20: 43841633-43851632 Glycine max
Glyma.20G201400 10.0kb downstream 10.0kb downstream 19349 true Chr20: 43822284-43841632 Glycine max
Glyma.20G201400 10.0kb downstream 10.0kb downstream 10000 false Chr20: 43822284-43832283 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303935 5265 Fabidae View MSA
124060864 5270 Rosid View MSA
123737400 5271 Pentapetalae View MSA
122792723 5272 Eudicot View MSA
122047395 5273 Angiosperm View MSA
121346129 5274 Embryophyte View MSA
123428105 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.83354 0.0 8.17574    
cufflinks 12.2449 0.0 32.7516   High
cufflinks 0.71683 0.0 2.4668    
cufflinks 0.507744 0.0 1.80331   Low
cufflinks 1.55912 0.0 4.88727    
cufflinks 2.42047 0.0 7.1187    
cufflinks 2.92574 0.0 8.41974    
cufflinks 0.520458 0.0 1.84609   Low
cufflinks 1.70549 0.0 5.26721    
cufflinks 1.28        
cufflinks 0.146        
cufflinks 1.326        
cufflinks 1.989        
cufflinks 0.89        
cufflinks 0.01     Low Low
cufflinks 6.075        
cufflinks 0.066     Low Low
cufflinks 3.946        
cufflinks 6.185        
cufflinks 6.47        
cufflinks 0.242        
cufflinks 6.073        
cufflinks 8.009     High High
cufflinks 0.183        
cufflinks 5.701        
cufflinks 0.24        

0 Strain