Gene : Glyma.20G202100 G. max Wm82.a2.v1
Defline:  (1 of 25) PF00917 - MATH domain (MATH) Genomic Order:  2021
Name:  ? Glyma.20G202100 Secondary Identifier:  ? PAC:30522780
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G202100 0.5kb upstream 0.5kb upstream 13026 true Chr20: 43886364-43899389 Glycine max
Glyma.20G202100 0.5kb upstream 0.5kb upstream 500 false Chr20: 43898890-43899389 Glycine max
Glyma.20G202100 0.5kb downstream 0.5kb downstream 13026 true Chr20: 43885864-43898889 Glycine max
Glyma.20G202100 0.5kb downstream 0.5kb downstream 500 false Chr20: 43885864-43886363 Glycine max
Glyma.20G202100 1.0kb upstream 1.0kb upstream 13526 true Chr20: 43886364-43899889 Glycine max
Glyma.20G202100 1.0kb upstream 1.0kb upstream 1000 false Chr20: 43898890-43899889 Glycine max
Glyma.20G202100 1.0kb downstream 1.0kb downstream 13526 true Chr20: 43885364-43898889 Glycine max
Glyma.20G202100 1.0kb downstream 1.0kb downstream 1000 false Chr20: 43885364-43886363 Glycine max
Glyma.20G202100 2.0kb upstream 2.0kb upstream 14526 true Chr20: 43886364-43900889 Glycine max
Glyma.20G202100 2.0kb upstream 2.0kb upstream 2000 false Chr20: 43898890-43900889 Glycine max
Glyma.20G202100 2.0kb downstream 2.0kb downstream 14526 true Chr20: 43884364-43898889 Glycine max
Glyma.20G202100 2.0kb downstream 2.0kb downstream 2000 false Chr20: 43884364-43886363 Glycine max
Glyma.20G202100 5.0kb upstream 5.0kb upstream 17526 true Chr20: 43886364-43903889 Glycine max
Glyma.20G202100 5.0kb upstream 5.0kb upstream 5000 false Chr20: 43898890-43903889 Glycine max
Glyma.20G202100 5.0kb downstream 5.0kb downstream 17526 true Chr20: 43881364-43898889 Glycine max
Glyma.20G202100 5.0kb downstream 5.0kb downstream 5000 false Chr20: 43881364-43886363 Glycine max
Glyma.20G202100 10.0kb upstream 10.0kb upstream 22526 true Chr20: 43886364-43908889 Glycine max
Glyma.20G202100 10.0kb upstream 10.0kb upstream 10000 false Chr20: 43898890-43908889 Glycine max
Glyma.20G202100 10.0kb downstream 10.0kb downstream 22526 true Chr20: 43876364-43898889 Glycine max
Glyma.20G202100 10.0kb downstream 10.0kb downstream 10000 false Chr20: 43876364-43886363 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312741 5265 Fabidae View MSA
124063906 5270 Rosid View MSA
123740151 5271 Pentapetalae View MSA
122794933 5272 Eudicot View MSA
122043519 5273 Angiosperm View MSA
121350769 5274 Embryophyte View MSA
123425613 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.13141 0.0 24.3487    
cufflinks 5.67887 0.0 17.4512    
cufflinks 6.70392 0.0 19.867    
cufflinks 6.48649 0.0 20.225    
cufflinks 6.10527 0.0 20.8751    
cufflinks 5.72036 0.0 17.9233    
cufflinks 14.3165 0.0 52.2806   High
cufflinks 5.39643 0.0 16.6455    
cufflinks 6.95189 0.0 23.7638    
cufflinks 1.0       Low
cufflinks 2.344       High
cufflinks 1.495        
cufflinks 1.295        
cufflinks 1.216       Low
cufflinks 2.426       High
cufflinks 1.822        
cufflinks 0.848       Low
cufflinks 1.62        
cufflinks 1.556        
cufflinks 2.076        
cufflinks 2.259       High
cufflinks 1.87        
cufflinks 1.484        
cufflinks 2.067        
cufflinks 1.973        
cufflinks 1.57        

0 Strain