Gene : Glyma.20G193400 G. max Wm82.a2.v1
Defline:  (1 of 7) PF04578 - Protein of unknown function, DUF594 (DUF594) Genomic Order:  1934
Name:  ? Glyma.20G193400 Secondary Identifier:  ? PAC:30519674
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G193400 0.5kb upstream 0.5kb upstream 3634 true Chr20: 43225002-43228635 Glycine max
Glyma.20G193400 0.5kb upstream 0.5kb upstream 500 false Chr20: 43228136-43228635 Glycine max
Glyma.20G193400 0.5kb downstream 0.5kb downstream 3634 true Chr20: 43224502-43228135 Glycine max
Glyma.20G193400 0.5kb downstream 0.5kb downstream 500 false Chr20: 43224502-43225001 Glycine max
Glyma.20G193400 1.0kb upstream 1.0kb upstream 4134 true Chr20: 43225002-43229135 Glycine max
Glyma.20G193400 1.0kb upstream 1.0kb upstream 1000 false Chr20: 43228136-43229135 Glycine max
Glyma.20G193400 1.0kb downstream 1.0kb downstream 4134 true Chr20: 43224002-43228135 Glycine max
Glyma.20G193400 1.0kb downstream 1.0kb downstream 1000 false Chr20: 43224002-43225001 Glycine max
Glyma.20G193400 2.0kb upstream 2.0kb upstream 5134 true Chr20: 43225002-43230135 Glycine max
Glyma.20G193400 2.0kb upstream 2.0kb upstream 2000 false Chr20: 43228136-43230135 Glycine max
Glyma.20G193400 2.0kb downstream 2.0kb downstream 5134 true Chr20: 43223002-43228135 Glycine max
Glyma.20G193400 2.0kb downstream 2.0kb downstream 2000 false Chr20: 43223002-43225001 Glycine max
Glyma.20G193400 5.0kb upstream 5.0kb upstream 8134 true Chr20: 43225002-43233135 Glycine max
Glyma.20G193400 5.0kb upstream 5.0kb upstream 5000 false Chr20: 43228136-43233135 Glycine max
Glyma.20G193400 5.0kb downstream 5.0kb downstream 8134 true Chr20: 43220002-43228135 Glycine max
Glyma.20G193400 5.0kb downstream 5.0kb downstream 5000 false Chr20: 43220002-43225001 Glycine max
Glyma.20G193400 10.0kb upstream 10.0kb upstream 13134 true Chr20: 43225002-43238135 Glycine max
Glyma.20G193400 10.0kb upstream 10.0kb upstream 10000 false Chr20: 43228136-43238135 Glycine max
Glyma.20G193400 10.0kb downstream 10.0kb downstream 13134 true Chr20: 43215002-43228135 Glycine max
Glyma.20G193400 10.0kb downstream 10.0kb downstream 10000 false Chr20: 43215002-43225001 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029142 5273 Angiosperm View MSA
122314211 5265 Fabidae View MSA
124074186 5270 Rosid View MSA
123752826 5271 Pentapetalae View MSA
122795885 5272 Eudicot View MSA
121350539 5274 Embryophyte View MSA
123381781 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0537562 0.0 0.213973 Low Low
cufflinks 0.20526 0.0 0.773359 Low  
cufflinks 0.704016 0.0 2.45676    
cufflinks 0.102307 0.0 0.397346 Low  
cufflinks 1.60561 0.0 5.1039    
cufflinks 13.5806 0.0 36.3131   High
cufflinks 0.0614069 0.0 0.243393 Low  
cufflinks 0.104693 0.0 0.406264 Low  
cufflinks 1.58647 0.0 5.03289    
cufflinks 0.845        
cufflinks 0.536        
cufflinks 1.117        
cufflinks 3.293       High
cufflinks 2.114        
cufflinks 0.145       Low
cufflinks 1.321        
cufflinks 0.593        
cufflinks 1.464        
cufflinks 1.536        
cufflinks 1.388        
cufflinks 0.42       Low
cufflinks 1.087        
cufflinks 3.405       High
cufflinks 0.682        
cufflinks 1.169        
cufflinks 1.102        

0 Strain