Gene : Glyma.20G193600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31499:SF9 - MYB FAMILY TRANSCRIPTION FACTOR Genomic Order:  1936
Name:  ? Glyma.20G193600 Secondary Identifier:  ? PAC:30523234
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G193600 0.5kb upstream 0.5kb upstream 4532 true Chr20: 43237781-43242312 Glycine max
Glyma.20G193600 0.5kb upstream 0.5kb upstream 500 false Chr20: 43241813-43242312 Glycine max
Glyma.20G193600 0.5kb downstream 0.5kb downstream 4532 true Chr20: 43237281-43241812 Glycine max
Glyma.20G193600 0.5kb downstream 0.5kb downstream 500 false Chr20: 43237281-43237780 Glycine max
Glyma.20G193600 1.0kb upstream 1.0kb upstream 5032 true Chr20: 43237781-43242812 Glycine max
Glyma.20G193600 1.0kb upstream 1.0kb upstream 1000 false Chr20: 43241813-43242812 Glycine max
Glyma.20G193600 1.0kb downstream 1.0kb downstream 5032 true Chr20: 43236781-43241812 Glycine max
Glyma.20G193600 1.0kb downstream 1.0kb downstream 1000 false Chr20: 43236781-43237780 Glycine max
Glyma.20G193600 2.0kb upstream 2.0kb upstream 6032 true Chr20: 43237781-43243812 Glycine max
Glyma.20G193600 2.0kb upstream 2.0kb upstream 2000 false Chr20: 43241813-43243812 Glycine max
Glyma.20G193600 2.0kb downstream 2.0kb downstream 6032 true Chr20: 43235781-43241812 Glycine max
Glyma.20G193600 2.0kb downstream 2.0kb downstream 2000 false Chr20: 43235781-43237780 Glycine max
Glyma.20G193600 5.0kb upstream 5.0kb upstream 9032 true Chr20: 43237781-43246812 Glycine max
Glyma.20G193600 5.0kb upstream 5.0kb upstream 5000 false Chr20: 43241813-43246812 Glycine max
Glyma.20G193600 5.0kb downstream 5.0kb downstream 9032 true Chr20: 43232781-43241812 Glycine max
Glyma.20G193600 5.0kb downstream 5.0kb downstream 5000 false Chr20: 43232781-43237780 Glycine max
Glyma.20G193600 10.0kb upstream 10.0kb upstream 14032 true Chr20: 43237781-43251812 Glycine max
Glyma.20G193600 10.0kb upstream 10.0kb upstream 10000 false Chr20: 43241813-43251812 Glycine max
Glyma.20G193600 10.0kb downstream 10.0kb downstream 14032 true Chr20: 43227781-43241812 Glycine max
Glyma.20G193600 10.0kb downstream 10.0kb downstream 10000 false Chr20: 43227781-43237780 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255013 5265 Fabidae View MSA
124064391 5270 Rosid View MSA
123753630 5271 Pentapetalae View MSA
122795386 5272 Eudicot View MSA
122048998 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350891 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.542 0.0 28.8654    
cufflinks 16.9785 0.0 80.0567   High
cufflinks 13.6508 0.0 51.7428   High
cufflinks 6.07863 0.0 23.6327    
cufflinks 4.02612 0.0 19.9853    
cufflinks 2.79805 0.0 13.8728   Low
cufflinks 7.64173 0.0 28.6604    
cufflinks 7.08128 0.0 26.5198    
cufflinks 4.33824 0.0 18.5598    
cufflinks 0.511        
cufflinks 0.077       Low
cufflinks 1.747       High
cufflinks 0.428        
cufflinks 0.642        
cufflinks 0.091       Low
cufflinks 0.71        
cufflinks 0.116        
cufflinks 1.085        
cufflinks 2.018       High
cufflinks 0.588        
cufflinks 0.052     Low Low
cufflinks 0.708        
cufflinks 1.489       High
cufflinks 0.056     Low Low
cufflinks 0.563        
cufflinks 0.072       Low

0 Strain