Gene : Glyma.20G194400 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR27000:SF185 - LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PEPR1-RELATED Genomic Order:  1944
Name:  ? Glyma.20G194400 Secondary Identifier:  ? PAC:30520205
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G194400 0.5kb upstream 0.5kb upstream 4559 true Chr20: 43321848-43326406 Glycine max
Glyma.20G194400 0.5kb upstream 0.5kb upstream 500 false Chr20: 43325907-43326406 Glycine max
Glyma.20G194400 0.5kb downstream 0.5kb downstream 4559 true Chr20: 43321348-43325906 Glycine max
Glyma.20G194400 0.5kb downstream 0.5kb downstream 500 false Chr20: 43321348-43321847 Glycine max
Glyma.20G194400 1.0kb upstream 1.0kb upstream 5059 true Chr20: 43321848-43326906 Glycine max
Glyma.20G194400 1.0kb upstream 1.0kb upstream 1000 false Chr20: 43325907-43326906 Glycine max
Glyma.20G194400 1.0kb downstream 1.0kb downstream 5059 true Chr20: 43320848-43325906 Glycine max
Glyma.20G194400 1.0kb downstream 1.0kb downstream 1000 false Chr20: 43320848-43321847 Glycine max
Glyma.20G194400 2.0kb upstream 2.0kb upstream 6059 true Chr20: 43321848-43327906 Glycine max
Glyma.20G194400 2.0kb upstream 2.0kb upstream 2000 false Chr20: 43325907-43327906 Glycine max
Glyma.20G194400 2.0kb downstream 2.0kb downstream 6059 true Chr20: 43319848-43325906 Glycine max
Glyma.20G194400 2.0kb downstream 2.0kb downstream 2000 false Chr20: 43319848-43321847 Glycine max
Glyma.20G194400 5.0kb upstream 5.0kb upstream 9059 true Chr20: 43321848-43330906 Glycine max
Glyma.20G194400 5.0kb upstream 5.0kb upstream 5000 false Chr20: 43325907-43330906 Glycine max
Glyma.20G194400 5.0kb downstream 5.0kb downstream 9059 true Chr20: 43316848-43325906 Glycine max
Glyma.20G194400 5.0kb downstream 5.0kb downstream 5000 false Chr20: 43316848-43321847 Glycine max
Glyma.20G194400 10.0kb upstream 10.0kb upstream 14059 true Chr20: 43321848-43335906 Glycine max
Glyma.20G194400 10.0kb upstream 10.0kb upstream 10000 false Chr20: 43325907-43335906 Glycine max
Glyma.20G194400 10.0kb downstream 10.0kb downstream 14059 true Chr20: 43311848-43325906 Glycine max
Glyma.20G194400 10.0kb downstream 10.0kb downstream 10000 false Chr20: 43311848-43321847 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122788329 5272 Eudicot View MSA
122297468 5265 Fabidae View MSA
124066125 5270 Rosid View MSA
123746657 5271 Pentapetalae View MSA
122046482 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.1716 0.0 3.75522   High
cufflinks 0.725787 0.0 2.46779    
cufflinks 0.448313 0.0 1.58774    
cufflinks 0.495481 0.0 1.74543    
cufflinks 0.458235 0.0 1.62974    
cufflinks 0.361937 0.0 1.30585   Low
cufflinks 1.05089 0.0 3.43117   High
cufflinks 0.341086 0.0 1.23451   Low
cufflinks 0.865092 0.0 2.88301    
cufflinks 0.468       Low
cufflinks 5.059       High
cufflinks 0.34       Low
cufflinks 0.594        
cufflinks 1.142        
cufflinks 6.03     High High
cufflinks 1.507        
cufflinks 0.596        
cufflinks 0.33       Low
cufflinks 0.934        
cufflinks 1.281        
cufflinks 6.83     High High
cufflinks 1.256        
cufflinks 1.305        
cufflinks 3.251        
cufflinks 1.472        
cufflinks 2.372        

0 Strain