Gene : Glyma.20G195200 G. max Wm82.a2.v1
Genomic Order:  1952 Name:  ? Glyma.20G195200
Secondary Identifier:  ? PAC:30519756
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G195200 0.5kb upstream 0.5kb upstream 8367 true Chr20: 43359732-43368098 Glycine max
Glyma.20G195200 0.5kb upstream 0.5kb upstream 500 false Chr20: 43367599-43368098 Glycine max
Glyma.20G195200 0.5kb downstream 0.5kb downstream 8367 true Chr20: 43359232-43367598 Glycine max
Glyma.20G195200 0.5kb downstream 0.5kb downstream 500 false Chr20: 43359232-43359731 Glycine max
Glyma.20G195200 1.0kb upstream 1.0kb upstream 8867 true Chr20: 43359732-43368598 Glycine max
Glyma.20G195200 1.0kb upstream 1.0kb upstream 1000 false Chr20: 43367599-43368598 Glycine max
Glyma.20G195200 1.0kb downstream 1.0kb downstream 8867 true Chr20: 43358732-43367598 Glycine max
Glyma.20G195200 1.0kb downstream 1.0kb downstream 1000 false Chr20: 43358732-43359731 Glycine max
Glyma.20G195200 2.0kb upstream 2.0kb upstream 9867 true Chr20: 43359732-43369598 Glycine max
Glyma.20G195200 2.0kb upstream 2.0kb upstream 2000 false Chr20: 43367599-43369598 Glycine max
Glyma.20G195200 2.0kb downstream 2.0kb downstream 9867 true Chr20: 43357732-43367598 Glycine max
Glyma.20G195200 2.0kb downstream 2.0kb downstream 2000 false Chr20: 43357732-43359731 Glycine max
Glyma.20G195200 5.0kb upstream 5.0kb upstream 12867 true Chr20: 43359732-43372598 Glycine max
Glyma.20G195200 5.0kb upstream 5.0kb upstream 5000 false Chr20: 43367599-43372598 Glycine max
Glyma.20G195200 5.0kb downstream 5.0kb downstream 12867 true Chr20: 43354732-43367598 Glycine max
Glyma.20G195200 5.0kb downstream 5.0kb downstream 5000 false Chr20: 43354732-43359731 Glycine max
Glyma.20G195200 10.0kb upstream 10.0kb upstream 17867 true Chr20: 43359732-43377598 Glycine max
Glyma.20G195200 10.0kb upstream 10.0kb upstream 10000 false Chr20: 43367599-43377598 Glycine max
Glyma.20G195200 10.0kb downstream 10.0kb downstream 17867 true Chr20: 43349732-43367598 Glycine max
Glyma.20G195200 10.0kb downstream 10.0kb downstream 10000 false Chr20: 43349732-43359731 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309159 5265 Fabidae View MSA
124068519 5270 Rosid View MSA
123739177 5271 Pentapetalae View MSA
122788918 5272 Eudicot View MSA
122044360 5273 Angiosperm View MSA
121349905 5274 Embryophyte View MSA
123427472 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.05774 0.0 27.1137    
cufflinks 10.7011 0.0 37.7732    
cufflinks 7.29416 0.0 25.1364    
cufflinks 12.6176 0.0 45.1477    
cufflinks 8.6218 0.0 29.7541    
cufflinks 3.69001 0.0 11.5605   Low
cufflinks 18.0319 0.0 69.158   High
cufflinks 7.5793 0.0 26.0132    
cufflinks 8.82907 0.0 30.4803    
cufflinks 1.735        
cufflinks 1.383       Low
cufflinks 2.411        
cufflinks 1.668        
cufflinks 1.998        
cufflinks 2.232        
cufflinks 2.415        
cufflinks 1.141       Low
cufflinks 2.611        
cufflinks 3.874       High
cufflinks 2.519        
cufflinks 1.529        
cufflinks 2.606        
cufflinks 2.557        
cufflinks 1.512        
cufflinks 2.489        
cufflinks 1.347       Low

0 Strain