Gene : Glyma.20G188000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR24298:SF47 - CYTOCHROME P450 77A4-RELATED Genomic Order:  1880
Name:  ? Glyma.20G188000 Secondary Identifier:  ? PAC:30521639
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G188000 0.5kb upstream 0.5kb upstream 2693 true Chr20: 42654896-42657588 Glycine max
Glyma.20G188000 0.5kb upstream 0.5kb upstream 500 false Chr20: 42657089-42657588 Glycine max
Glyma.20G188000 0.5kb downstream 0.5kb downstream 2693 true Chr20: 42654396-42657088 Glycine max
Glyma.20G188000 0.5kb downstream 0.5kb downstream 500 false Chr20: 42654396-42654895 Glycine max
Glyma.20G188000 1.0kb upstream 1.0kb upstream 3193 true Chr20: 42654896-42658088 Glycine max
Glyma.20G188000 1.0kb upstream 1.0kb upstream 1000 false Chr20: 42657089-42658088 Glycine max
Glyma.20G188000 1.0kb downstream 1.0kb downstream 3193 true Chr20: 42653896-42657088 Glycine max
Glyma.20G188000 1.0kb downstream 1.0kb downstream 1000 false Chr20: 42653896-42654895 Glycine max
Glyma.20G188000 2.0kb upstream 2.0kb upstream 4193 true Chr20: 42654896-42659088 Glycine max
Glyma.20G188000 2.0kb upstream 2.0kb upstream 2000 false Chr20: 42657089-42659088 Glycine max
Glyma.20G188000 2.0kb downstream 2.0kb downstream 4193 true Chr20: 42652896-42657088 Glycine max
Glyma.20G188000 2.0kb downstream 2.0kb downstream 2000 false Chr20: 42652896-42654895 Glycine max
Glyma.20G188000 5.0kb upstream 5.0kb upstream 7193 true Chr20: 42654896-42662088 Glycine max
Glyma.20G188000 5.0kb upstream 5.0kb upstream 5000 false Chr20: 42657089-42662088 Glycine max
Glyma.20G188000 5.0kb downstream 5.0kb downstream 7193 true Chr20: 42649896-42657088 Glycine max
Glyma.20G188000 5.0kb downstream 5.0kb downstream 5000 false Chr20: 42649896-42654895 Glycine max
Glyma.20G188000 10.0kb upstream 10.0kb upstream 12193 true Chr20: 42654896-42667088 Glycine max
Glyma.20G188000 10.0kb upstream 10.0kb upstream 10000 false Chr20: 42657089-42667088 Glycine max
Glyma.20G188000 10.0kb downstream 10.0kb downstream 12193 true Chr20: 42644896-42657088 Glycine max
Glyma.20G188000 10.0kb downstream 10.0kb downstream 10000 false Chr20: 42644896-42654895 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303850 5265 Fabidae View MSA
124063043 5270 Rosid View MSA
123738117 5271 Pentapetalae View MSA
122791184 5272 Eudicot View MSA
122050603 5273 Angiosperm View MSA
123429088 5275 Viridiplantae View MSA
121351760 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.2649 0.0 38.0644    
cufflinks 63.6973 0.0 193.454 High High
cufflinks 10.2389 0.0 27.4159    
cufflinks 11.8324 0.0 31.5913    
cufflinks 1.43303 0.0 4.73832    
cufflinks 15.9273 0.0 42.5542    
cufflinks 1.27534 0.0 4.27223    
cufflinks 14.7301 0.0 39.3231    
cufflinks 0.0730865 0.0 0.289538 Low Low
cufflinks 15.388     High  
cufflinks 0.041     Low  
cufflinks 17.962     High  
cufflinks 0.022     Low Low
cufflinks 0.008     Low Low
cufflinks 0.052     Low  
cufflinks 35.682     High  
cufflinks 0.023     Low Low
cufflinks 58.754     High High
cufflinks 87.222     High High
cufflinks 33.607     High  
cufflinks 0.054     Low  
cufflinks 39.098     High  
cufflinks 26.548     High  
cufflinks 0.062        
cufflinks 29.359     High  
cufflinks 0.039     Low  

0 Strain