Gene : Glyma.20G188300 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10359:SF28 - TRANSCRIPTIONAL ACTIVATOR DEMETER Genomic Order:  1883
Name:  ? Glyma.20G188300 Secondary Identifier:  ? PAC:30519787
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G188300 0.5kb upstream 0.5kb upstream 12373 true Chr20: 42683167-42695539 Glycine max
Glyma.20G188300 0.5kb upstream 0.5kb upstream 500 false Chr20: 42695040-42695539 Glycine max
Glyma.20G188300 0.5kb downstream 0.5kb downstream 12373 true Chr20: 42682667-42695039 Glycine max
Glyma.20G188300 0.5kb downstream 0.5kb downstream 500 false Chr20: 42682667-42683166 Glycine max
Glyma.20G188300 1.0kb upstream 1.0kb upstream 12873 true Chr20: 42683167-42696039 Glycine max
Glyma.20G188300 1.0kb upstream 1.0kb upstream 1000 false Chr20: 42695040-42696039 Glycine max
Glyma.20G188300 1.0kb downstream 1.0kb downstream 12873 true Chr20: 42682167-42695039 Glycine max
Glyma.20G188300 1.0kb downstream 1.0kb downstream 1000 false Chr20: 42682167-42683166 Glycine max
Glyma.20G188300 2.0kb upstream 2.0kb upstream 13873 true Chr20: 42683167-42697039 Glycine max
Glyma.20G188300 2.0kb upstream 2.0kb upstream 2000 false Chr20: 42695040-42697039 Glycine max
Glyma.20G188300 2.0kb downstream 2.0kb downstream 13873 true Chr20: 42681167-42695039 Glycine max
Glyma.20G188300 2.0kb downstream 2.0kb downstream 2000 false Chr20: 42681167-42683166 Glycine max
Glyma.20G188300 5.0kb upstream 5.0kb upstream 16873 true Chr20: 42683167-42700039 Glycine max
Glyma.20G188300 5.0kb upstream 5.0kb upstream 5000 false Chr20: 42695040-42700039 Glycine max
Glyma.20G188300 5.0kb downstream 5.0kb downstream 16873 true Chr20: 42678167-42695039 Glycine max
Glyma.20G188300 5.0kb downstream 5.0kb downstream 5000 false Chr20: 42678167-42683166 Glycine max
Glyma.20G188300 10.0kb upstream 10.0kb upstream 21873 true Chr20: 42683167-42705039 Glycine max
Glyma.20G188300 10.0kb upstream 10.0kb upstream 10000 false Chr20: 42695040-42705039 Glycine max
Glyma.20G188300 10.0kb downstream 10.0kb downstream 21873 true Chr20: 42673167-42695039 Glycine max
Glyma.20G188300 10.0kb downstream 10.0kb downstream 10000 false Chr20: 42673167-42683166 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314761 5265 Fabidae View MSA
124065197 5270 Rosid View MSA
123746757 5271 Pentapetalae View MSA
122794204 5272 Eudicot View MSA
122044419 5273 Angiosperm View MSA
121348532 5274 Embryophyte View MSA
123428690 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.61689 0.0 9.66213   High
cufflinks 1.58394 0.0 4.43582    
cufflinks 2.03142 0.0 5.55355    
cufflinks 1.05048 0.0 3.07592   Low
cufflinks 1.15944 0.0 3.37052    
cufflinks 1.35829 0.0 3.86937    
cufflinks 1.29712 0.0 3.72285    
cufflinks 1.32998 0.0 3.78621    
cufflinks 1.48836 0.0 4.19682    
cufflinks 0.945        
cufflinks 0.198       Low
cufflinks 0.588        
cufflinks 0.623        
cufflinks 0.253        
cufflinks 0.107       Low
cufflinks 2.002       High
cufflinks 0.164       Low
cufflinks 0.625        
cufflinks 0.331        
cufflinks 1.097        
cufflinks 0.381        
cufflinks 1.852       High
cufflinks 0.754        
cufflinks 0.627        
cufflinks 1.099        
cufflinks 0.444        

0 Strain