Gene : Glyma.20G192200 G. max Wm82.a2.v1
Defline:  (1 of 2) 1.1.1.82 - Malate dehydrogenase (NADP(+)) / NADP-linked malate dehydrogenase Genomic Order:  1922
Name:  ? Glyma.20G192200 Secondary Identifier:  ? PAC:30523229
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-241 Glycine max pathologic  
Gmax PWY-7117 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G192200 0.5kb upstream 0.5kb upstream 6146 true Chr20: 43084247-43090392 Glycine max
Glyma.20G192200 0.5kb upstream 0.5kb upstream 500 false Chr20: 43084247-43084746 Glycine max
Glyma.20G192200 0.5kb downstream 0.5kb downstream 6146 true Chr20: 43084747-43090892 Glycine max
Glyma.20G192200 0.5kb downstream 0.5kb downstream 500 false Chr20: 43090393-43090892 Glycine max
Glyma.20G192200 1.0kb upstream 1.0kb upstream 6646 true Chr20: 43083747-43090392 Glycine max
Glyma.20G192200 1.0kb upstream 1.0kb upstream 1000 false Chr20: 43083747-43084746 Glycine max
Glyma.20G192200 1.0kb downstream 1.0kb downstream 6646 true Chr20: 43084747-43091392 Glycine max
Glyma.20G192200 1.0kb downstream 1.0kb downstream 1000 false Chr20: 43090393-43091392 Glycine max
Glyma.20G192200 2.0kb upstream 2.0kb upstream 7646 true Chr20: 43082747-43090392 Glycine max
Glyma.20G192200 2.0kb upstream 2.0kb upstream 2000 false Chr20: 43082747-43084746 Glycine max
Glyma.20G192200 2.0kb downstream 2.0kb downstream 7646 true Chr20: 43084747-43092392 Glycine max
Glyma.20G192200 2.0kb downstream 2.0kb downstream 2000 false Chr20: 43090393-43092392 Glycine max
Glyma.20G192200 5.0kb upstream 5.0kb upstream 10646 true Chr20: 43079747-43090392 Glycine max
Glyma.20G192200 5.0kb upstream 5.0kb upstream 5000 false Chr20: 43079747-43084746 Glycine max
Glyma.20G192200 5.0kb downstream 5.0kb downstream 10646 true Chr20: 43084747-43095392 Glycine max
Glyma.20G192200 5.0kb downstream 5.0kb downstream 5000 false Chr20: 43090393-43095392 Glycine max
Glyma.20G192200 10.0kb upstream 10.0kb upstream 15646 true Chr20: 43074747-43090392 Glycine max
Glyma.20G192200 10.0kb upstream 10.0kb upstream 10000 false Chr20: 43074747-43084746 Glycine max
Glyma.20G192200 10.0kb downstream 10.0kb downstream 15646 true Chr20: 43084747-43100392 Glycine max
Glyma.20G192200 10.0kb downstream 10.0kb downstream 10000 false Chr20: 43090393-43100392 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308757 5265 Fabidae View MSA
124061971 5270 Rosid View MSA
123738843 5271 Pentapetalae View MSA
122785596 5272 Eudicot View MSA
122041880 5273 Angiosperm View MSA
121345837 5274 Embryophyte View MSA
123423785 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 39.3126 0.0 105.919 High High
cufflinks 23.8765 0.0 63.7079 High  
cufflinks 47.7341 0.0 130.405 High High
cufflinks 19.5652 0.0 52.3389    
cufflinks 4.02842 0.0 12.5929   Low
cufflinks 4.19342 0.0 13.0422   Low
cufflinks 14.0298 0.0 38.0836    
cufflinks 14.1651 0.0 38.3602    
cufflinks 4.31759 0.0 13.3566   Low
cufflinks 5.021        
cufflinks 0.743        
cufflinks 12.528     High High
cufflinks 0.53       Low
cufflinks 0.321       Low
cufflinks 2.168        
cufflinks 10.34     High  
cufflinks 0.394       Low
cufflinks 7.263        
cufflinks 7.265        
cufflinks 12.647     High High
cufflinks 0.519       Low
cufflinks 11.591     High High
cufflinks 9.188     High  
cufflinks 0.624        
cufflinks 12.285     High High
cufflinks 0.542       Low

0 Strain