Gene : Glyma.20G224700 G. max Wm82.a2.v1
Defline:  (1 of 309) PF00010 - Helix-loop-helix DNA-binding domain (HLH) Genomic Order:  2247
Name:  ? Glyma.20G224700 Secondary Identifier:  ? PAC:30521802
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G224700 0.5kb upstream 0.5kb upstream 5705 true Chr20: 45925919-45931623 Glycine max
Glyma.20G224700 0.5kb upstream 0.5kb upstream 500 false Chr20: 45925919-45926418 Glycine max
Glyma.20G224700 0.5kb downstream 0.5kb downstream 5705 true Chr20: 45926419-45932123 Glycine max
Glyma.20G224700 0.5kb downstream 0.5kb downstream 500 false Chr20: 45931624-45932123 Glycine max
Glyma.20G224700 1.0kb upstream 1.0kb upstream 6205 true Chr20: 45925419-45931623 Glycine max
Glyma.20G224700 1.0kb upstream 1.0kb upstream 1000 false Chr20: 45925419-45926418 Glycine max
Glyma.20G224700 1.0kb downstream 1.0kb downstream 6205 true Chr20: 45926419-45932623 Glycine max
Glyma.20G224700 1.0kb downstream 1.0kb downstream 1000 false Chr20: 45931624-45932623 Glycine max
Glyma.20G224700 2.0kb upstream 2.0kb upstream 7205 true Chr20: 45924419-45931623 Glycine max
Glyma.20G224700 2.0kb upstream 2.0kb upstream 2000 false Chr20: 45924419-45926418 Glycine max
Glyma.20G224700 2.0kb downstream 2.0kb downstream 7205 true Chr20: 45926419-45933623 Glycine max
Glyma.20G224700 2.0kb downstream 2.0kb downstream 2000 false Chr20: 45931624-45933623 Glycine max
Glyma.20G224700 5.0kb upstream 5.0kb upstream 10205 true Chr20: 45921419-45931623 Glycine max
Glyma.20G224700 5.0kb upstream 5.0kb upstream 5000 false Chr20: 45921419-45926418 Glycine max
Glyma.20G224700 5.0kb downstream 5.0kb downstream 10205 true Chr20: 45926419-45936623 Glycine max
Glyma.20G224700 5.0kb downstream 5.0kb downstream 5000 false Chr20: 45931624-45936623 Glycine max
Glyma.20G224700 10.0kb upstream 10.0kb upstream 15205 true Chr20: 45916419-45931623 Glycine max
Glyma.20G224700 10.0kb upstream 10.0kb upstream 10000 false Chr20: 45916419-45926418 Glycine max
Glyma.20G224700 10.0kb downstream 10.0kb downstream 15205 true Chr20: 45926419-45941623 Glycine max
Glyma.20G224700 10.0kb downstream 10.0kb downstream 10000 false Chr20: 45931624-45941623 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306645 5265 Fabidae View MSA
124070246 5270 Rosid View MSA
123744901 5271 Pentapetalae View MSA
122795444 5272 Eudicot View MSA
122046496 5273 Angiosperm View MSA
121350974 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.69997 0.0 17.483    
cufflinks 4.25886 0.0 15.7595   Low
cufflinks 15.9322 0.0 49.013    
cufflinks 11.4028 0.0 34.7081    
cufflinks 10.1394 0.0 31.2461    
cufflinks 2.88762 0.0 11.6865   Low
cufflinks 16.8145 0.0 50.3473    
cufflinks 29.6374 0.0 93.9261 High High
cufflinks 14.3882 0.0 43.9294    
cufflinks 2.43       High
cufflinks 1.043        
cufflinks 2.206       High
cufflinks 1.288        
cufflinks 0.398       Low
cufflinks 0.981        
cufflinks 0.47        
cufflinks 1.138        
cufflinks 0.581        
cufflinks 0.632        
cufflinks 0.334       Low
cufflinks 0.999        
cufflinks 0.335       Low
cufflinks 0.55        
cufflinks 1.907       High
cufflinks 0.288       Low
cufflinks 1.399        

0 Strain