Protein Family : PF00010 - Helix-loop-helix DNA-binding domain (HLH) 123744901

Method ID:  5271 Method Name:  Pentapetalae
Sequence Alignment:  View MSA Member Count:  41

41 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29598.t000023 (1 of 102) PF00010 - Helix-loop-helix DNA-binding domain (HLH) R. communis v0.1 4867   29598: 114544-119410
Cucsa.289090 (1 of 112) PF00010 - Helix-loop-helix DNA-binding domain (HLH) C. sativus v1.0 7487   scaffold02698: 583519-591005
Ciclev10001768m.g (1 of 104) PF00010 - Helix-loop-helix DNA-binding domain (HLH) C. clementina v1.0 5014   scaffold_5: 29438711-29443724
Lus10015909.g (1 of 164) PF00010 - Helix-loop-helix DNA-binding domain (HLH) L. usitatissimum v1.0 2745   scaffold201: 99088-101832
Lus10006587.g (1 of 164) PF00010 - Helix-loop-helix DNA-binding domain (HLH) L. usitatissimum v1.0 2853   scaffold36: 202783-205635
Gorai.007G277200 (1 of 195) PF00010 - Helix-loop-helix DNA-binding domain (HLH) G. raimondii v2.1 4968   Chr07: 47487215-47492182
Thecc1EG026346 (1 of 103) PF00010 - Helix-loop-helix DNA-binding domain (HLH) T. cacao v1.1 5410   scaffold_5: 37805719-37811128
Glyma.10G162300 (1 of 309) PF00010 - Helix-loop-helix DNA-binding domain (HLH) G. max Wm82.a2.v1 5100   Chr10: 39649880-39654979
Glyma.20G224700 (1 of 309) PF00010 - Helix-loop-helix DNA-binding domain (HLH) G. max Wm82.a2.v1 5205   Chr20: 45926419-45931623
Brara.B01176 (1 of 234) PF00010 - Helix-loop-helix DNA-binding domain (HLH) B. rapa FPsc v1.3 1546   A02: 5891123-5892668
Medtr1g080890 (1 of 161) PF00010 - Helix-loop-helix DNA-binding domain (HLH) M. truncatula Mt4.0v1 7231   chr1: 35993128-36000358
SapurV1A.0110s0180 (1 of 193) PF00010 - Helix-loop-helix DNA-binding domain (HLH) S. purpurea v1.0 8735   chr13: 3791853-3800587
SapurV1A.0729s0150 (1 of 193) PF00010 - Helix-loop-helix DNA-binding domain (HLH) S. purpurea v1.0 4633   chr05: 2685144-2689776
Eucgr.H04337 (1 of 125) PF00010 - Helix-loop-helix DNA-binding domain (HLH) E. grandis v2.0 4954   Chr08: 58988859-58993812
Prupe.6G343400 (1 of 110) PF00010 - Helix-loop-helix DNA-binding domain (HLH) P. persica v2.1 6068   Pp06: 29555806-29561873
Manes.08G134700 (1 of 155) PF00010 - Helix-loop-helix DNA-binding domain (HLH) M. esculenta v6.1 7099   Chromosome08: 30109125-30116223
Manes.09G153000 (1 of 155) PF00010 - Helix-loop-helix DNA-binding domain (HLH) M. esculenta v6.1 6048   Chromosome09: 26922590-26928637
Kalax.0194s0005 (1 of 249) PF00010 - Helix-loop-helix DNA-binding domain (HLH) K. laxiflora v1.1 3381   scaffold_194: 52270-55650
Kalax.0651s0018 (1 of 249) PF00010 - Helix-loop-helix DNA-binding domain (HLH) K. laxiflora v1.1 3485   scaffold_651: 172434-175918
Kaladp0082s0162 (1 of 137) PF00010 - Helix-loop-helix DNA-binding domain (HLH) K. fedtschenkoi v1.1 3515   Scaffold_82: 1552446-1555960
Tp57577_TGAC_v2_gene12828 (1 of 129) PF00010 - Helix-loop-helix DNA-binding domain (HLH) T. pratense v2 5409   Tp57577_TGAC_v2_LG3: 1982432-1987840
DCAR_024199 (1 of 4) PTHR16223//PTHR16223:SF15 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR UNE12-RELATED D. carota v2.0 3935   DCARv2_Chr7: 10648190-10652124
DCAR_027267 (1 of 4) PTHR16223//PTHR16223:SF15 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR UNE12-RELATED D. carota v2.0 3765   DCARv2_Chr8: 24578930-24582694
DCAR_002356 (1 of 150) PF00010 - Helix-loop-helix DNA-binding domain (HLH) D. carota v2.0 3400   DCARv2_Chr1: 28595365-28598764
Solyc09g083220.2 (1 of 3) PTHR16223:SF15 - TRANSCRIPTION FACTOR UNE12-RELATED S. lycopersicum ITAG2.4 4050   SL2.50ch09: 68883768-68887817
AUR62004950 (1 of 167) PF00010 - Helix-loop-helix DNA-binding domain (HLH) C. quinoa v1.0 8073   C_Quinoa_Scaffold_3820: 7246067-7254139
AUR62001007 (1 of 3) PTHR16223//PTHR16223:SF15 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR UNE12-RELATED C. quinoa v1.0 7464   C_Quinoa_Scaffold_2088: 12353902-12361365
Phvul.007G187500 (1 of 158) PF00010 - Helix-loop-helix DNA-binding domain (HLH) P. vulgaris v2.1 4660   Chr07: 30745526-30750185
Potri.005G053500 (1 of 174) PF00010 - Helix-loop-helix DNA-binding domain (HLH) P. trichocarpa v3.1 5487   Chr05: 3813811-3819297
Potri.013G041000 (1 of 174) PF00010 - Helix-loop-helix DNA-binding domain (HLH) P. trichocarpa v3.1 4738   Chr13: 2870317-2875054

41 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Ciclev10001768m C. clementina v1.0 123744901 PF00010 - Helix-loop-helix DNA-binding domain (HLH) 1 5271 Pentapetalae
Gorai.007G277200.1 G. raimondii v2.1 123744901 PF00010 - Helix-loop-helix DNA-binding domain (HLH) 1 5271 Pentapetalae
Thecc1EG026346t1 T. cacao v1.1 123744901 PF00010 - Helix-loop-helix DNA-binding domain (HLH) 1 5271 Pentapetalae
Kalax.0194s0005.1.p K. laxiflora v1.1 123744901 PF00010 - Helix-loop-helix DNA-binding domain (HLH) 2 5271 Pentapetalae
Kalax.0651s0018.1.p K. laxiflora v1.1 123744901 PF00010 - Helix-loop-helix DNA-binding domain (HLH) 2 5271 Pentapetalae
Solyc09g083220.2.1 S. lycopersicum ITAG2.4 123744901 PF00010 - Helix-loop-helix DNA-binding domain (HLH) 1 5271 Pentapetalae
AUR62001007-RA C. quinoa v1.0 123744901 PF00010 - Helix-loop-helix DNA-binding domain (HLH) 2 5271 Pentapetalae
Phvul.007G187500.1.p P. vulgaris v2.1 123744901 PF00010 - Helix-loop-helix DNA-binding domain (HLH) 1 5271 Pentapetalae
Potri.005G053500.2.p P. trichocarpa v3.1 123744901 PF00010 - Helix-loop-helix DNA-binding domain (HLH) 2 5271 Pentapetalae
Podel.13G043000.1.p P. deltoides WV94 v2.1 123744901 PF00010 - Helix-loop-helix DNA-binding domain (HLH) 2 5271 Pentapetalae
PGSC0003DMP400010802 S. tuberosum v4.03 123744901 PF00010 - Helix-loop-helix DNA-binding domain (HLH) 1 5271 Pentapetalae
VIT_205s0020g04620.1 V. vinifera v2.1 123744901 PF00010 - Helix-loop-helix DNA-binding domain (HLH) 2 5271 Pentapetalae
MD04G1224700 M. domestica v1.1 123744901 PF00010 - Helix-loop-helix DNA-binding domain (HLH) 2 5271 Pentapetalae
Ca_03755 C. arietinum v1.0 123744901 PF00010 - Helix-loop-helix DNA-binding domain (HLH) 1 5271 Pentapetalae
HanXRQChr12g0382231 H. annuus r1.2 123744901 PF00010 - Helix-loop-helix DNA-binding domain (HLH) 1 5271 Pentapetalae
gene16564-v2.0.a2-hybrid.t5 F. vesca v2.0.a2 123744901 PF00010 - Helix-loop-helix DNA-binding domain (HLH) 1 5271 Pentapetalae
29598.m000464 R. communis v0.1 123744901 PF00010 - Helix-loop-helix DNA-binding domain (HLH) 1 5271 Pentapetalae
Cucsa.289090.1 C. sativus v1.0 123744901 PF00010 - Helix-loop-helix DNA-binding domain (HLH) 1 5271 Pentapetalae
Lus10006587 L. usitatissimum v1.0 123744901 PF00010 - Helix-loop-helix DNA-binding domain (HLH) 2 5271 Pentapetalae
Lus10015909 L. usitatissimum v1.0 123744901 PF00010 - Helix-loop-helix DNA-binding domain (HLH) 2 5271 Pentapetalae
Glyma.20G224700.1.p G. max Wm82.a2.v1 123744901 PF00010 - Helix-loop-helix DNA-binding domain (HLH) 2 5271 Pentapetalae
Glyma.10G162300.1.p G. max Wm82.a2.v1 123744901 PF00010 - Helix-loop-helix DNA-binding domain (HLH) 2 5271 Pentapetalae
Brara.B01176.1.p B. rapa FPsc v1.3 123744901 PF00010 - Helix-loop-helix DNA-binding domain (HLH) 1 5271 Pentapetalae
Medtr1g080890.1 M. truncatula Mt4.0v1 123744901 PF00010 - Helix-loop-helix DNA-binding domain (HLH) 1 5271 Pentapetalae
SapurV1A.0110s0180.1.p S. purpurea v1.0 123744901 PF00010 - Helix-loop-helix DNA-binding domain (HLH) 2 5271 Pentapetalae
SapurV1A.0729s0150.1.p S. purpurea v1.0 123744901 PF00010 - Helix-loop-helix DNA-binding domain (HLH) 2 5271 Pentapetalae
Eucgr.H04337.1.p E. grandis v2.0 123744901 PF00010 - Helix-loop-helix DNA-binding domain (HLH) 1 5271 Pentapetalae
Prupe.6G343400.1.p P. persica v2.1 123744901 PF00010 - Helix-loop-helix DNA-binding domain (HLH) 1 5271 Pentapetalae
Manes.08G134700.1.p M. esculenta v6.1 123744901 PF00010 - Helix-loop-helix DNA-binding domain (HLH) 2 5271 Pentapetalae
Manes.09G153000.1.p M. esculenta v6.1 123744901 PF00010 - Helix-loop-helix DNA-binding domain (HLH) 2 5271 Pentapetalae