Gene : Eucgr.H04337 E. grandis v2.0
Defline:  (1 of 125) PF00010 - Helix-loop-helix DNA-binding domain (HLH) Genomic Order:  3281
Name:  ? Eucgr.H04337 Secondary Identifier:  ? PAC:32041818
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H04337 0.5kb upstream 0.5kb upstream 5454 true Chr08: 58988859-58994312 Eucalyptus grandis
Eucgr.H04337 0.5kb upstream 0.5kb upstream 500 false Chr08: 58993813-58994312 Eucalyptus grandis
Eucgr.H04337 0.5kb downstream 0.5kb downstream 5454 true Chr08: 58988359-58993812 Eucalyptus grandis
Eucgr.H04337 0.5kb downstream 0.5kb downstream 500 false Chr08: 58988359-58988858 Eucalyptus grandis
Eucgr.H04337 1.0kb upstream 1.0kb upstream 5954 true Chr08: 58988859-58994812 Eucalyptus grandis
Eucgr.H04337 1.0kb upstream 1.0kb upstream 1000 false Chr08: 58993813-58994812 Eucalyptus grandis
Eucgr.H04337 1.0kb downstream 1.0kb downstream 5954 true Chr08: 58987859-58993812 Eucalyptus grandis
Eucgr.H04337 1.0kb downstream 1.0kb downstream 1000 false Chr08: 58987859-58988858 Eucalyptus grandis
Eucgr.H04337 2.0kb upstream 2.0kb upstream 6954 true Chr08: 58988859-58995812 Eucalyptus grandis
Eucgr.H04337 2.0kb upstream 2.0kb upstream 2000 false Chr08: 58993813-58995812 Eucalyptus grandis
Eucgr.H04337 2.0kb downstream 2.0kb downstream 6954 true Chr08: 58986859-58993812 Eucalyptus grandis
Eucgr.H04337 2.0kb downstream 2.0kb downstream 2000 false Chr08: 58986859-58988858 Eucalyptus grandis
Eucgr.H04337 5.0kb upstream 5.0kb upstream 9954 true Chr08: 58988859-58998812 Eucalyptus grandis
Eucgr.H04337 5.0kb upstream 5.0kb upstream 5000 false Chr08: 58993813-58998812 Eucalyptus grandis
Eucgr.H04337 5.0kb downstream 5.0kb downstream 9954 true Chr08: 58983859-58993812 Eucalyptus grandis
Eucgr.H04337 5.0kb downstream 5.0kb downstream 5000 false Chr08: 58983859-58988858 Eucalyptus grandis
Eucgr.H04337 10.0kb upstream 10.0kb upstream 14954 true Chr08: 58988859-59003812 Eucalyptus grandis
Eucgr.H04337 10.0kb upstream 10.0kb upstream 10000 false Chr08: 58993813-59003812 Eucalyptus grandis
Eucgr.H04337 10.0kb downstream 10.0kb downstream 14954 true Chr08: 58978859-58993812 Eucalyptus grandis
Eucgr.H04337 10.0kb downstream 10.0kb downstream 10000 false Chr08: 58978859-58988858 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070246 5270 Rosid View MSA
123744901 5271 Pentapetalae View MSA
122795444 5272 Eudicot View MSA
122046496 5273 Angiosperm View MSA
121350974 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.8876 0.0 7.69666    
cufflinks 16.947 0.0 42.227   High
cufflinks 3.63535 0.0 9.3266    
cufflinks 2.90982 0.0 7.81835    
cufflinks 6.32565 0.0 16.4091    
cufflinks 2.04465 0.0 6.45768    

0 Strain