Gene : Potri.005G053500 P. trichocarpa v3.1
Defline:  (1 of 174) PF00010 - Helix-loop-helix DNA-binding domain (HLH) Genomic Order:  570
Name:  ? Potri.005G053500 Secondary Identifier:  ? PAC:37263277
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G053500 0.5kb upstream 0.5kb upstream 5987 true Chr05: 3813311-3819297 Populus trichocarpa
Potri.005G053500 0.5kb upstream 0.5kb upstream 500 false Chr05: 3813311-3813810 Populus trichocarpa
Potri.005G053500 0.5kb downstream 0.5kb downstream 5987 true Chr05: 3813811-3819797 Populus trichocarpa
Potri.005G053500 0.5kb downstream 0.5kb downstream 500 false Chr05: 3819298-3819797 Populus trichocarpa
Potri.005G053500 1.0kb upstream 1.0kb upstream 6487 true Chr05: 3812811-3819297 Populus trichocarpa
Potri.005G053500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 3812811-3813810 Populus trichocarpa
Potri.005G053500 1.0kb downstream 1.0kb downstream 6487 true Chr05: 3813811-3820297 Populus trichocarpa
Potri.005G053500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 3819298-3820297 Populus trichocarpa
Potri.005G053500 2.0kb upstream 2.0kb upstream 7487 true Chr05: 3811811-3819297 Populus trichocarpa
Potri.005G053500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 3811811-3813810 Populus trichocarpa
Potri.005G053500 2.0kb downstream 2.0kb downstream 7487 true Chr05: 3813811-3821297 Populus trichocarpa
Potri.005G053500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 3819298-3821297 Populus trichocarpa
Potri.005G053500 5.0kb upstream 5.0kb upstream 10487 true Chr05: 3808811-3819297 Populus trichocarpa
Potri.005G053500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 3808811-3813810 Populus trichocarpa
Potri.005G053500 5.0kb downstream 5.0kb downstream 10487 true Chr05: 3813811-3824297 Populus trichocarpa
Potri.005G053500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 3819298-3824297 Populus trichocarpa
Potri.005G053500 10.0kb upstream 10.0kb upstream 15487 true Chr05: 3803811-3819297 Populus trichocarpa
Potri.005G053500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 3803811-3813810 Populus trichocarpa
Potri.005G053500 10.0kb downstream 10.0kb downstream 15487 true Chr05: 3813811-3829297 Populus trichocarpa
Potri.005G053500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 3819298-3829297 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122455308 5262 Malpighiales View MSA
124253131 5268 Malvidae View MSA
124070246 5270 Rosid View MSA
123744901 5271 Pentapetalae View MSA
122795444 5272 Eudicot View MSA
122046496 5273 Angiosperm View MSA
121350974 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain