Gene : Glyma.20G225200 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR22595:SF62 - HEVEIN-LIKE PREPROPROTEIN Genomic Order:  2252
Name:  ? Glyma.20G225200 Secondary Identifier:  ? PAC:30520510
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G225200 0.5kb upstream 0.5kb upstream 1271 true Chr20: 45955484-45956754 Glycine max
Glyma.20G225200 0.5kb upstream 0.5kb upstream 500 false Chr20: 45955484-45955983 Glycine max
Glyma.20G225200 0.5kb downstream 0.5kb downstream 1271 true Chr20: 45955984-45957254 Glycine max
Glyma.20G225200 0.5kb downstream 0.5kb downstream 500 false Chr20: 45956755-45957254 Glycine max
Glyma.20G225200 1.0kb upstream 1.0kb upstream 1771 true Chr20: 45954984-45956754 Glycine max
Glyma.20G225200 1.0kb upstream 1.0kb upstream 1000 false Chr20: 45954984-45955983 Glycine max
Glyma.20G225200 1.0kb downstream 1.0kb downstream 1771 true Chr20: 45955984-45957754 Glycine max
Glyma.20G225200 1.0kb downstream 1.0kb downstream 1000 false Chr20: 45956755-45957754 Glycine max
Glyma.20G225200 2.0kb upstream 2.0kb upstream 2771 true Chr20: 45953984-45956754 Glycine max
Glyma.20G225200 2.0kb upstream 2.0kb upstream 2000 false Chr20: 45953984-45955983 Glycine max
Glyma.20G225200 2.0kb downstream 2.0kb downstream 2771 true Chr20: 45955984-45958754 Glycine max
Glyma.20G225200 2.0kb downstream 2.0kb downstream 2000 false Chr20: 45956755-45958754 Glycine max
Glyma.20G225200 5.0kb upstream 5.0kb upstream 5771 true Chr20: 45950984-45956754 Glycine max
Glyma.20G225200 5.0kb upstream 5.0kb upstream 5000 false Chr20: 45950984-45955983 Glycine max
Glyma.20G225200 5.0kb downstream 5.0kb downstream 5771 true Chr20: 45955984-45961754 Glycine max
Glyma.20G225200 5.0kb downstream 5.0kb downstream 5000 false Chr20: 45956755-45961754 Glycine max
Glyma.20G225200 10.0kb upstream 10.0kb upstream 10771 true Chr20: 45945984-45956754 Glycine max
Glyma.20G225200 10.0kb upstream 10.0kb upstream 10000 false Chr20: 45945984-45955983 Glycine max
Glyma.20G225200 10.0kb downstream 10.0kb downstream 10771 true Chr20: 45955984-45966754 Glycine max
Glyma.20G225200 10.0kb downstream 10.0kb downstream 10000 false Chr20: 45956755-45966754 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298032 5265 Fabidae View MSA
124067822 5270 Rosid View MSA
123742703 5271 Pentapetalae View MSA
122790413 5272 Eudicot View MSA
122047650 5273 Angiosperm View MSA
121350536 5274 Embryophyte View MSA
123381778 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.04631 0.0 3.92462   High
cufflinks 0.0691382 0.0 0.295312 Low  
cufflinks 0.30527 0.0 1.20489    
cufflinks 0.056746 0.0 0.245799 Low Low
cufflinks 0.3136 0.0 1.23553    
cufflinks 0.0646251 0.0 0.276952 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.205741 0.0 0.823905 Low  
cufflinks 0.793133 0.0 3.01062   High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 14.912     High High
cufflinks 0.176        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.071     Low  
cufflinks 0.984        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.822        
cufflinks 0.029     Low Low
cufflinks 0.109        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 7.665     High High
cufflinks 0.022     Low Low
cufflinks 0.024     Low Low
cufflinks 37.793     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.035        

0 Strain