Gene : Glyma.20G223100 G. max Wm82.a2.v1
Defline:  (1 of 25) PF04852 - Protein of unknown function (DUF640) (DUF640) Genomic Order:  2231
Name:  ? Glyma.20G223100 Secondary Identifier:  ? PAC:30521901
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G223100 0.5kb upstream 0.5kb upstream 2197 true Chr20: 45773288-45775484 Glycine max
Glyma.20G223100 0.5kb upstream 0.5kb upstream 500 false Chr20: 45774985-45775484 Glycine max
Glyma.20G223100 0.5kb downstream 0.5kb downstream 2197 true Chr20: 45772788-45774984 Glycine max
Glyma.20G223100 0.5kb downstream 0.5kb downstream 500 false Chr20: 45772788-45773287 Glycine max
Glyma.20G223100 1.0kb upstream 1.0kb upstream 2697 true Chr20: 45773288-45775984 Glycine max
Glyma.20G223100 1.0kb upstream 1.0kb upstream 1000 false Chr20: 45774985-45775984 Glycine max
Glyma.20G223100 1.0kb downstream 1.0kb downstream 2697 true Chr20: 45772288-45774984 Glycine max
Glyma.20G223100 1.0kb downstream 1.0kb downstream 1000 false Chr20: 45772288-45773287 Glycine max
Glyma.20G223100 2.0kb upstream 2.0kb upstream 3697 true Chr20: 45773288-45776984 Glycine max
Glyma.20G223100 2.0kb upstream 2.0kb upstream 2000 false Chr20: 45774985-45776984 Glycine max
Glyma.20G223100 2.0kb downstream 2.0kb downstream 3697 true Chr20: 45771288-45774984 Glycine max
Glyma.20G223100 2.0kb downstream 2.0kb downstream 2000 false Chr20: 45771288-45773287 Glycine max
Glyma.20G223100 5.0kb upstream 5.0kb upstream 6697 true Chr20: 45773288-45779984 Glycine max
Glyma.20G223100 5.0kb upstream 5.0kb upstream 5000 false Chr20: 45774985-45779984 Glycine max
Glyma.20G223100 5.0kb downstream 5.0kb downstream 6697 true Chr20: 45768288-45774984 Glycine max
Glyma.20G223100 5.0kb downstream 5.0kb downstream 5000 false Chr20: 45768288-45773287 Glycine max
Glyma.20G223100 10.0kb upstream 10.0kb upstream 11697 true Chr20: 45773288-45784984 Glycine max
Glyma.20G223100 10.0kb upstream 10.0kb upstream 10000 false Chr20: 45774985-45784984 Glycine max
Glyma.20G223100 10.0kb downstream 10.0kb downstream 11697 true Chr20: 45763288-45774984 Glycine max
Glyma.20G223100 10.0kb downstream 10.0kb downstream 10000 false Chr20: 45763288-45773287 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307412 5265 Fabidae View MSA
124063298 5270 Rosid View MSA
123753170 5271 Pentapetalae View MSA
122789282 5272 Eudicot View MSA
122049887 5273 Angiosperm View MSA
121351474 5274 Embryophyte View MSA
123382179 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0824628 0.0 0.332546 Low Low
cufflinks 11.3734 0.0 31.2552   High
cufflinks 0.415223 0.0 1.57291    
cufflinks 0.189472 0.0 0.740959    
cufflinks 2.52162 0.0 8.32006    
cufflinks 0.363549 0.0 1.38165    
cufflinks 0.310384 0.0 1.18728    
cufflinks 30.0518 0.0 80.3794 High High
cufflinks 3.21314 0.0 10.2931    
cufflinks 5.239       High
cufflinks 0.035     Low  
cufflinks 0.268        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.234        
cufflinks 0.228        
cufflinks 0.263        
cufflinks 0.082     Low  
cufflinks 6.927       High
cufflinks 0.054     Low  
cufflinks 0.091        
cufflinks 0.073     Low  
cufflinks 0.062     Low  
cufflinks 0.092        
cufflinks 0.108        
cufflinks 0.028     Low Low

0 Strain